RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NOMO3P69849 1222 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 NFIL3Q16649 462 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 CCNYL1Q8N7R7 359 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 PPP1R36Q96LQ0 422 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
MSH6-215ENST00000622629 CCND1P24385 295 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 STX3Q13277 289 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 KIZQ2M2Z5 673 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
MSH6-215ENST00000622629 KATNAL2Q8IYT4 538 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 ANGPTL2Q9UKU9 493 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 CCDC22O60826 627 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 LYPLA2O95372 231 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 MMP14P50281 582 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
MSH6-215ENST00000622629 METTL23Q86XA0 190 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 RNF19AQ9NV58 838 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 BCAP29Q9UHQ4 241 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 B2RBV5 119 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 OPLAHO14841 1288 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 GRIN3BO60391 1043 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 PEX10O60683 326 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 ANP32DO95626 131 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 SLC25A27O95847 323 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 GH1P01241 217 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.27
MSH6-215ENST00000622629 MX2P20592 715 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 ELK3P41970 407 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 KDELC2Q7Z4H8 507 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.27
MSH6-215ENST00000622629 CEP120Q8N960 986 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.27
MSH6-215ENST00000622629 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 SHOC2Q9UQ13 582 aa13.4□□□□□ -0.27
MSH6-215ENST00000622629 H3BRJ5 948 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 GAS2O43903 313 aaKnown RBP13.39□□□□□ -0.27
MSH6-215ENST00000622629 BANF1O75531 89 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 GJB1P08034 283 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 SULT1E1P49888 294 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 ZPBP2Q6X784 338 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 RYBPQ8N488 228 aaPredicted RBP13.39□□□□□ -0.27
MSH6-215ENST00000622629 CHRNB2P17787 502 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 ADSSP30520 456 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 ARPP19P56211 112 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 POLE2P56282 527 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 BMPR2Q13873 1038 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 STILQ15468 1287 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 CHI3L2Q15782 390 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 DENND1BQ6P3S1 775 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
MSH6-215ENST00000622629 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 CLEC4DQ8WXI8 215 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 TMEM237Q96Q45 408 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 THTPAQ9BU02 230 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 ABT1Q9ULW3 272 aaKnown RBP13.39□□□□□ -0.27
MSH6-215ENST00000622629 PYGBP11216 843 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 VDRP11473 427 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 MIPP30301 263 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 SH2D4BQ5SQS7 431 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 TCP10LQ8TDR4 215 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 SHCBP1LQ9BZQ2 653 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 RXFP1Q9HBX9 757 aa13.39□□□□□ -0.27
MSH6-215ENST00000622629 INSRRP14616 1297 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 MMP13P45452 471 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ART3Q13508 389 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 CAPSQ13938 189 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 TAF1BQ53T94 588 aaPredicted RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 DCAF12L1Q5VU92 463 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ZCCHC9Q8N567 271 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 RNF139Q8WU17 664 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ATXN2LQ8WWM7 1075 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 E2F7Q96AV8 911 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 NOCTQ9UK39 431 aaKnown RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 STXBP5LQ9Y2K9 1186 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 MYH3P11055 1940 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 MOCS2O96007 188 aaPredicted RBP13.38□□□□□ -0.27
MSH6-215ENST00000622629 GHRP10912 638 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 LRRC36Q1X8D7 754 aa13.38□□□□□ -0.27
MSH6-215ENST00000622629 FAM131BQ86XD5 332 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms