RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 TNPO2O14787 897 aaKnown RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DLK2Q6UY11 383 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 RIOX2Q8IUF8 465 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 FAM111AQ96PZ2 611 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 PHTF1Q9UMS5 762 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DCDC2CA8MYV0 355 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 NOVP48745 357 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 TPI1P60174 286 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 EEF1DP3Q658K8 133 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 FAM131BQ86XD5 332 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 RYBPQ8N488 228 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 VCXQ9H320 206 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 CD248Q9HCU0 757 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 CFLARO15519 480 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DHX15O43143 795 aaKnown RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DIAPH2O60879 1101 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 CST3P01034 146 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 CETPP11597 493 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 DEUP1Q05D60 604 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 SLC7A14Q8TBB6 771 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 TMEM134Q9H6X4 195 aa13.84□□□□□ -0.19
SIRPA-204ENST00000622179 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
SIRPA-204ENST00000622179 CD4P01730 458 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 NFICP08651 508 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 AKAP5P24588 427 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 MIPP30301 263 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.19
SIRPA-204ENST00000622179 PTK6Q13882 451 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 PAFAH2Q99487 392 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 LRRC19Q9H756 370 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.19
SIRPA-204ENST00000622179 MAFO75444 373 aaPredicted RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 MICAL2O94851 1124 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 ADCYAP1R1P41586 468 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 COPS2P61201 443 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 KDSRQ06136 332 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 MMEL1Q495T6 779 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 CYB5D1Q6P9G0 228 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 RASSF3Q86WH2 238 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 NDUFAF2Q8N183 169 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 CCDC68Q9H2F9 335 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 FSCN2O14926 492 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 UBOX5O94941 541 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 CHRNB2P17787 502 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 PEX19P40855 299 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 DRG2P55039 364 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 TTC27Q6P3X3 843 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 FSD1LQ9BXM9 530 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 DFFAO00273 331 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 PPP1R12AO14974 1030 aaPredicted RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 SNRPAP09012 282 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 SLFN11Q7Z7L1 901 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 LRRC6Q86X45 466 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 ALKBH8Q96BT7 664 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 MYCBPQ99417 103 aaPredicted RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 ACO2Q99798 780 aaKnown RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
SIRPA-204ENST00000622179 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 16.2
SIRPA-204ENST00000622179 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.2
SIRPA-204ENST00000622179 ZNF536O15090 1300 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 A0A0B4J269 797 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 SPECC1L-ADORA2AF8WAN1 911 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 CXCL11O14625 94 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 ADORA2AP29274 412 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 EPHX2P34913 555 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 EPHB1P54762 984 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 CELF3Q5SZQ8 465 aaKnown RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 ARMC2Q8NEN0 867 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 SH3GL2Q99962 352 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 MANSC1Q9H8J5 431 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 ARHGAP28Q9P2N2 729 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 BARX2Q9UMQ3 279 aaPredicted RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 FARP2O94887 1054 aaPredicted RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 TARSP26639 723 aaKnown RBP13.82□□□□□ -0.2
SIRPA-204ENST00000622179 RTP1P59025 263 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 PACS2Q86VP3 889 aa13.82□□□□□ -0.2
SIRPA-204ENST00000622179 THEM5Q8N1Q8 247 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms