RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PTGER2P43116 358 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CSE1LP55060 971 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 BST2Q10589 180 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 ART3Q13508 389 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CAPSQ13938 189 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 LRRC14Q15048 493 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 POLD3Q15054 466 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 CCDC157Q569K6 752 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 EEF1DP3Q658K8 133 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 SLFN11Q7Z7L1 901 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 DDX42Q86XP3 938 aaKnown RBP eCLIP9.63□□□□□ -0.87
GGA3-223ENST00000621870 SCUBE3Q8IX30 993 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 TMEM199Q8N511 208 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SYN2Q92777 582 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 ZNF669Q96BR6 464 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 CNPY3Q9BT09 278 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 LACRTQ9GZZ8 138 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 OSGEPQ9NPF4 335 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CHST12Q9NRB3 414 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 PAK5Q9P286 719 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 DCTN4Q9UJW0 460 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CFAP99D6REC4 459 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 TTC4O95801 387 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 MAPTP10636 758 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 HADHAP40939 763 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 GYS2P54840 703 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 ZNF280AP59817 542 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 MRPS6P82932 125 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 GTF2H3Q13889 308 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SLC39A12Q504Y0 691 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 TFAP2DQ7Z6R9 452 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 BLOC1S5Q8TDH9 187 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 ATG4AQ8WYN0 398 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 LENG1Q96BZ8 264 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 KLHL29Q96CT2 875 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 APOL2Q9BQE5 337 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CINPQ9BW66 212 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 SLC7A5P2Q9GIP4 190 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 HIPK3Q9H422 1215 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 XPO7Q9UIA9 1087 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 NEU2Q9Y3R4 380 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SNCAIPQ9Y6H5 919 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SHPRHQ149N8 1683 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CBX4O00257 560 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 ZNF263O14978 683 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 JCHAINP01591 159 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SERPIND1P05546 499 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 SP100P23497 879 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 TSNAXIP1Q2TAA8 658 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 PTRHD1Q6GMV3 140 aaKnown RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
GGA3-223ENST00000621870 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 KAT5Q92993 513 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 HSD17B14Q9BPX1 270 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 HTATIP2Q9BUP3 242 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 CDT1Q9H211 546 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 MROH7Q68CQ1 1323 aa9.63□□□□□ -0.87
GGA3-223ENST00000621870 NFAT5O94916 1531 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 B4GALT5O43286 388 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 SPAG7O75391 227 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ASGR1P07306 291 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 HIST1H2AGP0C0S8 130 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 GZMAP12544 262 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 HIST1H2ADP20671 130 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 VSNL1P62760 191 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 UGCGQ16739 394 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 RABGAP1LQ5R372 815 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 WSCD1Q658N2 575 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ANO5Q75V66 913 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 SDCCAG3Q96C92 435 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 HIST1H2AHQ96KK5 128 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 FAM84AQ96KN4 292 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 HIST1H2AJQ99878 128 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 DUSP9Q99956 384 aaKnown RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 H2AFJQ9BTM1 129 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 DRC3Q9H069 523 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 CARD9Q9H257 536 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 DNAJC18Q9H819 358 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 PLA2G4CQ9UP65 541 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ADGRB2O60241 1585 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 E2F8A0AVK6 867 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 FZD9O00144 591 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 SPTLC1O15269 473 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 MTSS1O43312 755 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 DIAPH2O60879 1101 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 PHF2O75151 1096 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 USP10Q14694 798 aaKnown RBP9.62□□□□□ -0.87
GGA3-223ENST00000621870 NFIL3Q16649 462 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 KYNUQ16719 465 aa9.62□□□□□ -0.87
GGA3-223ENST00000621870 ZRANB3Q5FWF4 1079 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms