RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 L3MBTL3Q96JM7 780 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CEP170P1Q96L14 293 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RAD54BQ9Y620 910 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 AIM2O14862 343 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SNAPC5O75971 98 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FGAP02671 866 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MYL4P12829 197 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PIGHQ14442 188 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC14Q15048 493 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ZMYM1Q5SVZ6 1142 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FAM83BQ5T0W9 1011 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 KCTD1Q719H9 257 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RASGRP2Q7LDG7 609 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PIK3C3Q8NEB9 887 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RBM15Q96T37 977 aaKnown RBP eCLIP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RXFP1Q9HBX9 757 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PI4KBQ9UBF8 816 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PREX2Q70Z35 1606 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 UPP2O95045 317 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 POLBP06746 335 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PTPN4P29074 926 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 TGFB2P61812 414 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ROR2Q01974 943 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC36Q1X8D7 754 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 NEDD1Q8NHV4 660 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FAM81AQ8TBF8 368 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ACAD9Q9H845 621 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 K7ERI5 159 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PSMD14O00487 310 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PHGDHO43175 533 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CYP19A1P11511 503 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CACNA2D1P54289 1103 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ITGA9Q13797 1035 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 DCAF4L1Q3SXM0 396 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TWF2Q6IBS0 349 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TUBA3EQ6PEY2 450 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CLEC4GQ6UXB4 293 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 NAT9Q9BTE0 207 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ARMC7Q9H6L4 198 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PLGRKTQ9HBL7 147 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 C8orf4Q9NR00 106 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CYP39A1Q9NYL5 469 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 AKAP7Q9P0M2 348 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TAGLN3Q9UI15 199 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 UBA6A0AVT1 1052 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TMEM120BA0PK00 339 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GSAPA4D1B5 854 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 NR3C1P04150 777 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ACADLP28330 430 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PRELPP51888 382 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GTF2H3Q13889 308 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF699Q32M78 642 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 HEATR4Q86WZ0 1026 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 RASSF5Q8WWW0 418 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 NEK6Q9HC98 313 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ARHGEF38Q9NXL2 777 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 HEY1Q9Y5J3 304 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GUCA1AP43080 201 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 KCNB1Q14721 858 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 SPDYAQ5MJ70 313 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 FAM160B2Q86V87 743 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GUF1Q8N442 669 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 KLHL23Q8NBE8 558 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 AFG1LQ8WV93 481 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ASIC4Q96FT7 647 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TECPR2O15040 1411 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TRIM66O15016 1216 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ALDH1A1P00352 501 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PHKA1P46020 1223 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CASP4P49662 377 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GEMIN4P57678 1058 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 PTK7Q13308 1070 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 FAM83EQ2M2I3 478 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ATP13A5Q4VNC0 1218 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 TRAPPC11Q7Z392 1133 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 AP3S1Q92572 193 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 WNK4Q96J92 1243 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 WDR12Q9GZL7 423 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 DDX47Q9H0S4 455 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 COMMD8Q9NX08 183 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 EURLQ9NYK6 297 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 NXF1Q9UBU9 619 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 MCM8Q9UJA3 840 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC182A6NF36 153 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GNB5O14775 395 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 SOAT2O75908 522 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 DDNO94850 711 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CATSPER4Q7RTX7 472 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CENPLQ8N0S6 344 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 OR6P1Q8NGX9 317 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 C9orf16Q9BUW7 83 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 C1QTNF1Q9BXJ1 281 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 REXO4Q9GZR2 422 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms