RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TCRBV7S3A2A0A539 114 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 INO80B-WBP1J3KQ70 363 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 CYB561D2O14569 222 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 DNALI1O14645 258 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 PROSCO94903 275 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 ITGB5P18084 799 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 CCNFP41002 786 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 RARRES1P49788 294 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 GDF10P55107 478 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 GEMIN4P57678 1058 aaKnown RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 GPX6P59796 221 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MRPS9P82933 396 aaKnown RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MCL1Q07820 350 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MTMR1Q13613 665 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 CUL3Q13618 768 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 RASA2Q15283 850 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MTERF2Q49AM1 385 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 SH2D4BQ5SQS7 431 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 ZCCHC23Q6ZST2 131 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MFN1Q8IWA4 741 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 ANKRD13AQ8IZ07 590 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 NME8Q8N427 588 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 BBOF1Q8ND07 529 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 PPP4R1Q8TF05 950 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 EZH1Q92800 747 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 FAM149B1Q96BN6 582 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 NMD3Q96D46 503 aaKnown RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 ACAP3Q96P50 834 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 MCEEQ96PE7 176 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 ZNF184Q99676 751 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 TEX13BQ9BXU2 312 aa7.27□□□□□ -1.24
NEDD9-216ENST00000620854 INO80BQ9C086 356 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-216ENST00000620854 LOC100653049A0A140TA62 436 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 E5RJQ4 531 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 KRT34O76011 436 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 NPTXRO95502 500 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 VIL1P09327 827 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 RFX1P22670 979 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 GLRA2P23416 452 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 BRD2P25440 801 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CIITAP33076 1130 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 TMPRSS15P98073 1019 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 STXBP2Q15833 593 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CTC1Q2NKJ3 1217 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 NBPF12Q5TAG4 269 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 ENDOVQ8N8Q3 282 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 IL31RAQ8NI17 732 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SH3TC2Q8TF17 1288 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 FAM136AQ96C01 138 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 AGBL1Q96MI9 1066 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 MRIQ9BWK5 157 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 KRT82Q9NSB4 513 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CENPFP49454 3210 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 STRCP1A6NGW2 1772 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 TYROBPO43914 113 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 KLRC2P26717 231 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 YWHABP31946 246 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SLC12A2P55011 1212 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SNX16P57768 344 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 MAMLD1Q13495 774 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 UGCGQ16739 394 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 WDR72Q3MJ13 1102 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 FAM47CQ5HY64 1035 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 FAXCQ5TGI0 409 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SH3BP5LQ7L8J4 393 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SESTD1Q86VW0 696 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 ZBTB8OSQ8IWT0 167 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 LRRC43Q8N309 656 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 PPM1NQ8N819 430 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CFAP36Q96G28 342 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 CLIC5Q9NZA1 410 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 COL16A1Q07092 1604 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 E2F8A0AVK6 867 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 A6NJR5 290 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 H0YCG3 227 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 LIASO43766 372 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SORBS2O94875 1100 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 ZWINTO95229 277 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 PGM3O95394 542 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 TOP3BO95985 862 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 LMNAP02545 664 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 GNA15P30679 374 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 POLR2BP30876 1174 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 EPHX2P34913 555 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 ATXN3P54252 364 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 FAAP100Q0VG06 881 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 KLF1Q13351 362 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 LRRC23Q53EV4 343 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 DNAJC24Q6P3W2 148 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 ZBTB33Q86T24 672 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 GPC2Q8N158 579 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 FAM71DQ8N9W8 422 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms