RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PON1P27169 355 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 LIG4P49917 911 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 AUHQ13825 339 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 MYO1HQ8N1T3 1032 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 POC5Q8NA72 575 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 MCEEQ96PE7 176 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CYP4F12Q9HCS2 524 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF224Q9NZL3 707 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 EMSYQ7Z589 1322 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 C6orf222P0C671 652 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 HOXC9P31274 260 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 DHDDSQ86SQ9 333 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 NCAPG2Q86XI2 1143 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TTC13Q8NBP0 860 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 PSD4Q8NDX1 1056 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ACCSQ96QU6 501 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SYTL2Q9HCH5 934 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KRT87PA6NCN2 255 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CYP4F2P78329 520 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CYP4F3Q08477 520 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SPRED3Q2MJR0 410 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF284Q2VY69 593 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 LIN52Q52LA3 116 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 RFFLQ8WZ73 363 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 GPATCH1Q9BRR8 931 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 EPS8L2Q9H6S3 715 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 NRDE2Q9H7Z3 1164 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 A0A1W2PPM1 405 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 UNCXA6NJT0 531 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SLC16A4O15374 487 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 DDAH1O94760 285 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CYP4B1P13584 511 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TMEM139Q8IV31 216 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 IFNL2Q8IZJ0 200 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SKA1Q96BD8 255 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 MECRQ9BV79 373 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 FANCEQ9HB96 536 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ATXN2Q99700 1313 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 RNF103O00237 685 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF23P17027 643 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ITIH2P19823 946 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 DMP1Q13316 513 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 EARS2Q5JPH6 523 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CD109Q6YHK3 1445 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ROPN1BQ9BZX4 212 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 EPB41L1Q9H4G0 881 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ROPN1Q9HAT0 212 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 USE1Q9NZ43 259 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SPAG6O75602 509 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 C11orf91Q3C1V1 193 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 XKR9Q5GH70 373 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 RALGPS1Q5JS13 557 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CKAP2Q8WWK9 683 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TAS2R14Q9NYV8 317 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 STMN3Q9NZ72 180 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 HEMK1Q9Y5R4 338 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 PFDN6O15212 129 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 HOXD12P35452 270 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SLC13A5Q86YT5 568 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 LRMDAQ9H2I8 198 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ADPRHL2Q9NX46 363 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 DPP3Q9NY33 737 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF222Q9UK12 451 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KNOP1Q1ED39 458 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 N4BP2L1Q5TBK1 243 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 PPP4R4Q6NUP7 873 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ARHGEF1Q92888 912 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 PTPRN2Q92932 1015 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 FAM162AQ96A26 154 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ELMO2Q96JJ3 720 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KATNAL1Q9BW62 490 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF518AQ6AHZ1 1483 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 CUL7Q14999 1698 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ASNSP08243 561 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 MXI1P50539 228 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SNAP47Q5SQN1 464 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 FAM180AQ6UWF9 173 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA6LQ8N4H0 392 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 SNX31Q8N9S9 440 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 RAD21L1Q9H4I0 556 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KLHL2O95198 593 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 OSBPP22059 807 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 S100A1P23297 94 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ORC1Q13415 861 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 AGKQ53H12 422 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 POTEAQ6S8J7 498 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 XKR5Q6UX68 686 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 BNC2Q6ZN30 1099 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 NUP160Q12769 1436 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 RRP1BQ14684 758 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 LRRC20Q8TCA0 184 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 MMP19Q99542 508 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TRIM9Q9C026 710 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KIF14Q15058 1648 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 AFF2P51816 1311 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TCOF1Q13428 1488 aaKnown RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 EPS8Q12929 822 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 ASB12Q8WXK4 309 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms