RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CCDC50Q8IVM0 306 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 NIPA2Q8N8Q9 360 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 SLCO2A1Q92959 643 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 OSBPL8Q9BZF1 889 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 UNC93B1Q9H1C4 597 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 NEU2Q9Y3R4 380 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 KRT3P12035 628 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 IVDP26440 423 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 GABRB2P47870 512 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 SOWAHAQ2M3V2 549 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 TRIM71Q2Q1W2 868 aaKnown RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 RAB6CQ53S08 254 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 XKR4Q5GH76 650 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 NME8Q8N427 588 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 PPM1EQ8WY54 764 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 FMO2Q99518 471 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 SENP6Q9GZR1 1112 aaPredicted RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 RAB6CQ9H0N0 254 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 AGO3Q9H9G7 860 aaKnown RBP18.45■□□□□ 0.54
CNOT3-209ENST00000617930 TSPAN16Q9UKR8 245 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 CEP83Q9Y592 693 aa18.45■□□□□ 0.54
CNOT3-209ENST00000617930 C3orf70A6NLC5 250 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PODXLO00592 558 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PPFIA2O75334 1257 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 P4HA1P13674 534 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 NR1D1P20393 614 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 GSCP56915 257 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 NFX1Q12986 1120 aaKnown RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PCBP1Q15365 356 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■□□ 18.2
CNOT3-209ENST00000617930 PTGISQ16647 500 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 CEP85LQ5SZL2 805 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 ZNF618Q5T7W0 954 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PPP1R26Q5T8A7 1209 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 RNF180Q86T96 592 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PRUNE1Q86TP1 453 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PCSK9Q8NBP7 692 aaKnown RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 LRRC45Q96CN5 670 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 MCRS1Q96EZ8 462 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 METTL5Q9NRN9 209 aaKnown RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 MEIS3P2A8K0S8 358 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 HMGB1P1B2RPK0 211 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PIRO00625 290 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 LRCH4O75427 683 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 FGFR1P11362 822 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PIGHQ14442 188 aaPredicted RBP18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PKDCCQ504Y2 493 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 LCLAT1Q6UWP7 414 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 ACOT1Q86TX2 421 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 TTC30AQ86WT1 665 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 ATP6V1G3Q96LB4 118 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PLVAPQ9BX97 442 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 NT5C1AQ9BXI3 368 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.547e-6■□□□□ 9.4
CNOT3-209ENST00000617930 DPEP3Q9H4B8 488 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 WBP1LQ9NX94 342 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 STRIP2Q9ULQ0 834 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 IPPQ9Y573 584 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 TRPV2Q9Y5S1 764 aa18.44■□□□□ 0.54
CNOT3-209ENST00000617930 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 A0A1W2PQ45 241 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 A0A1W2PQY0 241 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 ECEL1O95672 775 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 AXLP30530 894 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 YARSP54577 528 aaKnown RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 KRT17Q04695 432 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 ZNF844Q08AG5 666 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 TRIP13Q15645 432 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 TTC31Q49AM3 519 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 SH3PXD2AQ5TCZ1 1133 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 LRRC38Q5VT99 294 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 ART4Q93070 314 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 TRIM6Q9C030 488 aaPredicted RBP18.43■□□□□ 0.54
CNOT3-209ENST00000617930 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
CNOT3-209ENST00000617930 NDUFAB1O14561 156 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 PSMA2P25787 234 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 TAP1Q03518 808 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 ZNF268Q14587 947 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-209ENST00000617930 PMF1Q6P1K2 205 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 RCOR2Q8IZ40 523 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 RASAL2Q9UJF2 1139 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 E5RJQ4 531 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 LMO2P25791 158 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 AFF1P51825 1210 aaKnown RBP18.42■□□□□ 0.54
CNOT3-209ENST00000617930 PRMT2P55345 433 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 TAF5Q15542 800 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 KCNT1Q5JUK3 1230 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 KAZNQ674X7 775 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 RPAINQ86UA6 219 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 LRRC52Q8N7C0 313 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 BEST2Q8NFU1 509 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 UBLCP1Q8WVY7 318 aaPredicted RBP18.42■□□□□ 0.54
CNOT3-209ENST00000617930 AAASQ9NRG9 546 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms