RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 PDCD11Q14690 1871 aaKnown RBP9.21□□□□□ -0.93
CNTNAP3B-213ENST00000617848 M0QZQ0 153 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 HOXA2O43364 376 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 HCRTO43612 131 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 B3GAT3O94766 335 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 GJB6O95452 261 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CYP11A1P05108 521 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CCDC130P13994 396 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PCSK1P29120 753 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ADORA2BP29275 332 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ACADSBP45954 432 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 GJA8P48165 433 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 BCAT1P54687 386 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RPL7AP62424 266 aaKnown RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PDE4CQ08493 712 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 BST2Q10589 180 aaKnown RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PIGHQ14442 188 aaPredicted RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TRIM60Q495X7 471 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 GLE1Q53GS7 698 aaKnown RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SEL1L2Q5TEA6 688 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CC2D1AQ6P1N0 951 aaPredicted RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CD300LGQ6UXG3 332 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TMEM110Q86TL2 294 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CPNE8Q86YQ8 564 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RHOT1Q8IXI2 618 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 B3GALNT2Q8NCR0 500 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 KRT35Q92764 455 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 HSFY1Q96LI6 401 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 MCEEQ96PE7 176 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 LPIN3Q9BQK8 851 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PAAF1Q9BRP4 392 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PLVAPQ9BX97 442 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PARD6BQ9BYG5 372 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ST7Q9NRC1 585 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 FAM49BQ9NUQ9 324 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 DDX43Q9NXZ2 648 aaKnown RBP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TJP2Q9UDY2 1190 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TMEM59LQ9UK28 342 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CDH9Q9ULB4 789 aa9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.21□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TARSL2A2RTX5 802 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CCDC188H7C350 402 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TMEM189-UBE2V1I3L0A0 370 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PSTPIP1O43586 416 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ATP2C2O75185 946 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 DDHD2O94830 711 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PYGMP11217 842 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TYMPP19971 482 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 MCM3P25205 808 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CYP2C18P33260 490 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RFC1P35251 1148 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 BRCC3P46736 316 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RPL34P49207 117 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CTCFP49711 727 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RGS7P49802 495 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 CCL23P55773 120 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SLC8A3P57103 927 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 DSC1Q08554 894 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ACAP1Q15027 740 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 MDH1BQ5I0G3 518 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 FAM102AQ5T9C2 384 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 DCAF12L1Q5VU92 463 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PMF1Q6P1K2 205 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ZNF280BQ86YH2 543 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ZDHHC17Q8IUH5 632 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 COLGALT2Q8IYK4 626 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ABI1Q8IZP0 508 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 THEM5Q8N1Q8 247 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 NIPA2Q8N8Q9 360 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 JOSD2Q8TAC2 188 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SLC2A14Q8TDB8 520 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 FNIP1Q8TF40 1166 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 MAIP1Q8WWC4 291 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RSPH1Q8WYR4 309 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ALG3Q92685 438 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SCLYQ96I15 445 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RNPC3Q96LT9 517 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 SYT15Q9BQS2 421 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 RHOXF2Q9BQY4 288 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 DUSP16Q9BY84 665 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 C11orf49Q9H6J7 331 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ANKZF1Q9H8Y5 726 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 METTL5Q9NRN9 209 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TMEM39AQ9NV64 488 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TBC1D13Q9NVG8 400 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ARGLU1Q9NWB6 273 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 USTQ9Y2C2 406 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 ATP11BQ9Y2G3 1177 aa9.2□□□□□ -0.94
CNTNAP3B-213ENST00000617848 TIMM13Q9Y5L4 95 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms