RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PCDHA6Q9UN73 950 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 PCDHA8Q9Y5H6 950 aa5.23□□□□□ -1.57
CUL3-216ENST00000617432 EYSQ5T1H1 3165 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 MYH7BA7E2Y1 1941 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 SIP14410 1827 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 NKRFO15226 690 aaKnown RBP eCLIP5.22□□□□□ -1.57
CUL3-216ENST00000617432 NBNO60934 754 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 CABYRO75952 493 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 LARGE1O95461 756 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 LGALS2P05162 132 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 IQCF3P0C7M6 154 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 ARP10275 920 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 KCNA2P16389 499 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 MARK3P27448 753 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 BCL6P41182 706 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 SOX9P48436 509 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 METAP2P50579 478 aaKnown RBP eCLIP5.22□□□□□ -1.57
CUL3-216ENST00000617432 NAPAP54920 295 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 STK3Q13188 491 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 NTRK3Q16288 839 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 PTGISQ16647 500 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 KIAA0753Q2KHM9 967 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 TRIM71Q2Q1W2 868 aaKnown RBP5.22□□□□□ -1.57
CUL3-216ENST00000617432 JAKMIP3Q5VZ66 844 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 VASNQ6EMK4 673 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 BLOC1S2Q6QNY1 142 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 USP38Q8NB14 1042 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 PPTC7Q8NI37 304 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 FRS2Q8WU20 508 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 CPLX3Q8WVH0 158 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 DIO2Q92813 273 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 GJA10Q969M2 543 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 CHAMP1Q96JM3 812 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 OR14A2Q96R54 314 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 PCYT2Q99447 389 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 CDX2Q99626 313 aaPredicted RBP5.22□□□□□ -1.57
CUL3-216ENST00000617432 NKX2-4Q9H2Z4 354 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 PSTPIP2Q9H939 334 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 IL23AQ9NPF7 189 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 GJB4Q9NTQ9 266 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 VPS54Q9P1Q0 977 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 CEP72Q9P209 647 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 UBIAD1Q9Y5Z9 338 aa5.22□□□□□ -1.57
CUL3-216ENST00000617432 COL6A3P12111 3177 aa5.21□□□□□ -1.57
CUL3-216ENST00000617432 NID2Q14112 1375 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 GSTTP1A0A1W2PQM5 241 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 LCHNA4D1U4 455 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SMCO2A6NFE2 343 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 EPOPA6NHQ4 379 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 DDX39AO00148 427 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 FIBPO43427 364 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 CDC14BO60729 498 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SMIM10L2AP0DMW4 78 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SMIM10L2BP0DMW5 78 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 CALM1P0DP23 149 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 CALM2P0DP24 149 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 CALM3P0DP25 149 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SMARCA1P28370 1054 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 PDIA3P30101 505 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 ICAM3P32942 547 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 RPS19P39019 145 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 GNAQP50148 359 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 DEFB103AP81534 67 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SMAD3P84022 425 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 ST3GAL1Q11201 340 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 ITGB3BPQ13352 177 aaPredicted RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 PPIGQ13427 754 aaKnown RBP eCLIP5.21□□□□□ -1.58
CUL3-216ENST00000617432 DGKDQ16760 1214 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 PHF19Q5T6S3 580 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 ZNF618Q5T7W0 954 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 TMEM199Q8N511 208 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 TET1Q8NFU7 2136 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 PHOSPHO1Q8TCT1 267 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 HERVK_113Q902F9 699 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 MPHOSPH6Q99547 160 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 LZTS2Q9BRK4 669 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SLC26A6Q9BXS9 759 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 ANO3Q9BYT9 981 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 AGXT2Q9BYV1 514 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 RNPEPQ9H4A4 650 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 CERS4Q9HA82 394 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 MLXIPQ9HAP2 919 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 RIC8AQ9NPQ8 531 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 SETD4Q9NVD3 440 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 RBM28Q9NW13 759 aaKnown RBP5.21□□□□□ -1.58
CUL3-216ENST00000617432 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 BARHL2Q9NY43 387 aa5.21□□□□□ -1.58
CUL3-216ENST00000617432 COL4A4P53420 1690 aaPredicted RBP5.2□□□□□ -1.58
CUL3-216ENST00000617432 TRIP12Q14669 1992 aaPredicted RBP5.2□□□□□ -1.58
CUL3-216ENST00000617432 B4DLN1 442 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 FAM86B1E9PN63 330 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 H0Y858 1186 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 NUDT3O95989 172 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 CCNE2O96020 404 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 FGBP02675 491 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 FAM86B2P0C5J1 330 aa5.2□□□□□ -1.58
CUL3-216ENST00000617432 ZNF888P0CJ79 500 aaPredicted RBP5.2□□□□□ -1.58
CUL3-216ENST00000617432 CKBP12277 381 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms