RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PDE6CP51160 858 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 STILQ15468 1287 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 DDR2Q16832 855 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 PPM1LQ5SGD2 360 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 SDHAF4Q5VUM1 108 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 TAF3Q5VWG9 929 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 E4F1Q66K89 784 aaPredicted RBP16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 ELMSAN1Q6PJG2 1045 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 VSTM1Q6UX27 236 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 NOP9Q86U38 636 aaKnown RBP16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 FMNL3Q8IVF7 1028 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 ANKRD52Q8NB46 1076 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 KCNK16Q96T55 309 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 DUSP16Q9BY84 665 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 HESX1Q9UBX0 185 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 YIPF1Q9Y548 306 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 INSL5Q9Y5Q6 135 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 AKR1B15C9JRZ8 316 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 F8VP50 259 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 RFPL2O75678 378 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZMYND10O75800 440 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 BEST1O76090 585 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 CFHP08603 1231 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 SKILP12757 684 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 ALDH1A3P47895 512 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 MAP3K7CLP57077 242 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 RPL10AP62906 217 aaKnown RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 TWF1Q12792 350 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 DENND1BQ6P3S1 775 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 RTL10Q7L3V2 364 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 TTC30AQ86WT1 665 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 C12orf76Q8N812 135 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 OR8K1Q8NGG5 319 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 EPS8L1Q8TE68 723 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 GIPC2Q8TF65 315 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 SLC20A1Q8WUM9 679 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 SYN2Q92777 582 aaPredicted RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 SMOQ99835 787 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 PDCL3Q9H2J4 239 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 TMEM30AQ9NV96 361 aa16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 NOCTQ9UK39 431 aaKnown RBP16.54■□□□□ 0.24
PCDHGC3-204ENST00000617222 M0QYV0 167 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 TRIM66O15016 1216 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 CCL16O15467 120 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 MFAP3LO75121 409 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 LRG1P02750 347 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 SRGAP2BP0DMP2 458 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 NPR3P17342 541 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 CHRNB2P17787 502 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 ANXA13P27216 316 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 PDE4CQ08493 712 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 PKDCCQ504Y2 493 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 ANKRD54Q6NXT1 300 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 CLEC20AQ6ZU45 233 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZMIZ2Q8NF64 920 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 GPR152Q8TDT2 470 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 C8orf48Q96LL4 319 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 DMAP1Q9NPF5 467 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 DZANK1Q9NVP4 752 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
PCDHGC3-204ENST00000617222 CCDC195A0A1B0GUA6 201 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 MMEP08473 750 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 ATF6P18850 670 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 PRKCIP41743 596 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 BCAT1P54687 386 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 EPHB3P54753 998 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 SLC8A3P57103 927 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 CDR2Q01850 454 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 KLHL30Q0D2K2 578 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 BST2Q10589 180 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 PLD1Q13393 1074 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZNF677Q86XU0 584 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 PASD1Q8IV76 773 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 CNGA4Q8IV77 575 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 STKLD1Q8NE28 680 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 SECISBP2LQ93073 1101 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 DNAJC7Q99615 494 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 APOL5Q9BWW9 433 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 HAUS4Q9H6D7 363 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 CSNK1G1Q9HCP0 422 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
PCDHGC3-204ENST00000617222 ATG2AQ2TAZ0 1938 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 TULP2O00295 520 aa16.51■□□□□ 0.23
PCDHGC3-204ENST00000617222 HNRNPH3P31942 346 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms