RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ATP11AP98196 1134 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 KIZQ2M2Z5 673 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 MCEEQ96PE7 176 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 FMO2Q99518 471 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 FAM49AQ9H0Q0 323 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 CNOT10Q9H9A5 744 aaKnown RBP12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 VTA1Q9NP79 307 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 SETD4Q9NVD3 440 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 PLXNA1Q9UIW2 1896 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 B4GALT4O60513 344 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PROSCO94903 275 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 RALAP11233 206 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 CD19P15391 556 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 MMP8P22894 467 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 COILP38432 576 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 GRM1Q13255 1194 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 SGSM1Q2NKQ1 1148 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 RNF220Q5VTB9 566 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 DENND1BQ6P3S1 775 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 DPH6Q7L8W6 267 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PCMTD2Q9NV79 361 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 TRIM33Q9UPN9 1127 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 ASB3Q9Y575 518 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 F8VP50 259 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 NPTXRO95502 500 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 MMP3P08254 477 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 CHRNA3P32297 505 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PHKA2P46019 1235 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 VPS41P49754 854 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 CCNG1P51959 295 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 GRB14Q14449 540 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 GRIK4Q16099 956 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 DEFB115Q30KQ5 88 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PLEKHA7Q6IQ23 1121 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PHF13Q86YI8 300 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 LMNTD2Q8IXW0 634 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 OR6J1Q8NGC5 347 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 ANKRD36BP1Q96IX9 119 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 RAB17Q9H0T7 212 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 CDHR5Q9HBB8 845 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 ZMYND8Q9ULU4 1186 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 HES2Q9Y543 173 aa12.01□□□□□ -0.49
PCDHGA9-202ENST00000616887 PIK3R2O00459 728 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 STRNO43815 780 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 TSPAN1O60635 241 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 TNNC2P02585 160 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 KRT10P13645 584 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 SCNN1BP51168 640 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 SGO2Q562F6 1265 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 ZNF484Q5JVG2 852 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 TMEM154Q6P9G4 183 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 CXorf38Q8TB03 319 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 CENPTQ96BT3 561 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 TINF2Q9BSI4 451 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 EPB41L4BQ9H329 900 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 FLRT1Q9NZU1 646 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 NKX1-2Q9UD57 310 aaPredicted RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 MANSC4A6NHS7 340 aaPredicted RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 POLR2BP30876 1174 aaKnown RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 IFNAR2P48551 515 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 MRPS35P82673 323 aaKnown RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 ACVR2BQ13705 512 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 DHX34Q14147 1143 aaKnown RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 HIC1Q14526 733 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 LIN9Q5TKA1 542 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 PRMT1Q99873 361 aaKnown RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 FAM114A2Q9NRY5 505 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 DNAJC17Q9NVM6 304 aaKnown RBP12□□□□□ -0.49
PCDHGA9-202ENST00000616887 PCYOX1Q9UHG3 505 aa12□□□□□ -0.49
PCDHGA9-202ENST00000616887 DOCK3Q8IZD9 2030 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 ANK1P16157 1881 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 HGSO14964 777 aaPredicted RBP11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 TP73O15350 636 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 ECEL1O95672 775 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 IMPDH2P12268 514 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 AP3M2P53677 418 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 COPS2P61201 443 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 CCL14Q16627 93 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 CYP1B1Q16678 543 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 FAM182AQ5T1J6 154 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 KAZNQ674X7 775 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 TRIM72Q6ZMU5 477 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 FEZF2Q8TBJ5 459 aa11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.99□□□□□ -0.49
PCDHGA9-202ENST00000616887 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms