RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 CYP1A1P04798 512 aaPredicted RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 VIL1P09327 827 aaKnown RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 FAM86B2P0C5J1 330 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 GNA15P30679 374 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 HADHQ16836 314 aaKnown RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 UTS2BQ765I0 119 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 FOXP3Q9BZS1 431 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 GOLGA8QA0A0J9YX86 632 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 GOLGA8OA6NCC3 632 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 GOLGA8NF8WBI6 632 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 ECE2O60344 883 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 APRTP07741 180 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 FAM58BPP0C7Q3 252 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 SNRNP35Q16560 246 aaKnown RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 CDO1Q16878 200 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 C16orf46Q6P387 395 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 SCARA5Q6ZMJ2 495 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 C16orf86Q6ZW13 317 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 AMIGO2Q86SJ2 522 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 RBM17Q96I25 401 aaKnown RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 TSNARE1Q96NA8 513 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 SEMA6AQ9H2E6 1030 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 GPRC5CQ9NQ84 441 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 RAB6BQ9NRW1 208 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 MYH1P12882 1939 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 NTSR2O95665 410 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 KCNA4P22459 653 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 INHBCP55103 352 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 MORF4L2Q15014 288 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 PDK1Q15118 436 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 PTAR1Q7Z6K3 402 aaPredicted RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
SYNRG-223ENST00000616179 ZC3H7BQ9UGR2 993 aaKnown RBP16.31■□□□□ 0.2
SYNRG-223ENST00000616179 DCXO43602 365 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 EIF2B2P49770 351 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 TPD52P55327 224 aaPredicted RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 GAD2Q05329 585 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 CLVS1Q8IUQ0 354 aaPredicted RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ZNF398Q8TD17 642 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 MRPL46Q9H2W6 279 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SELENONQ9NZV5 590 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ZNF862O60290 1169 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SOX11P35716 441 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 PCYT1AP49585 367 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 PKNOX1P55347 436 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 EIF3EP60228 445 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 TREML1Q86YW5 311 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 PPIL6Q8IXY8 311 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 KDM1AO60341 852 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 TRMUO75648 421 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 PROSCO94903 275 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 FGFR3P22607 806 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 AOC3Q16853 763 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ACTL9Q8TC94 416 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ZMAT2Q96NC0 199 aaKnown RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 LYPLA1O75608 230 aaPredicted RBP16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ALAS1P13196 640 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ACTR3P61158 418 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 CYP1B1Q16678 543 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SPOPLQ6IQ16 392 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 CCDC33Q8N5R6 958 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 KCNK16Q96T55 309 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 AP4B1Q9Y6B7 739 aa16.3■□□□□ 0.2
SYNRG-223ENST00000616179 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
SYNRG-223ENST00000616179 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 H3BSA7 217 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 TFPTP0C1Z6 253 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 PSMC3P17980 439 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 MTTPP55157 894 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
SYNRG-223ENST00000616179 NLRX1Q86UT6 975 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
SYNRG-223ENST00000616179 HERPUD2Q9BSE4 406 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms