RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
CDH4-203ENST00000614565 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
CDH4-203ENST00000614565 ZFYVE19Q96K21 471 aa13.12□□□□□ -0.31
CDH4-203ENST00000614565 RASGRP1O95267 797 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 GCKP35557 465 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 HLA-DQA1Q5Y7H0 255 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 STMN1P16949 149 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PPM1AP35813 382 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 LHX1P48742 406 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 ALDH18A1P54886 795 aaKnown RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 HPCAP84074 193 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 ZNF211Q13398 564 aaPredicted RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 INSCQ1MX18 579 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 ANKRD23Q86SG2 305 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 CLYBLQ8N0X4 340 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 SIRPGQ9P1W8 387 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 GNSP15586 552 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 HALP42357 657 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 TUFMP49411 452 aaKnown RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 RWDD2BP57060 319 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 TEAD4Q15561 434 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 CCL14Q16627 93 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 TRIM16O95361 564 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 YBX3P16989 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH4-203ENST00000614565 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 TDRD5Q8NAT2 981 aaKnown RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 SAYSD1Q9NPB0 183 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 EXTL3O43909 919 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 ENO2P09104 434 aaPredicted RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 STAT4Q14765 748 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
CDH4-203ENST00000614565 BBS2Q9BXC9 721 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 FTHL17Q9BXU8 183 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 ELOVL2Q9NXB9 296 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 PCDHB11Q9Y5F2 797 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
CDH4-203ENST00000614565 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH4-203ENST00000614565 NCF1BA6NI72 391 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 NCF1CA8MVU1 366 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 MMP3P08254 477 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 GRK3P35626 688 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 NRIP1P48552 1158 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 MTM1Q13496 603 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 FAR2Q96K12 515 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 ADAM32Q8TC27 787 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 MSH3P20585 1137 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 ACADSBP45954 432 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 ZSCAN26Q16670 478 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 MMS22LQ6ZRQ5 1243 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 SLC44A2Q8IWA5 706 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 KCNB2Q92953 911 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 DTNAQ9Y4J8 743 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 CREMQ03060 361 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH4-203ENST00000614565 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 MRPS25P82663 173 aaKnown RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 SETMARQ53H47 684 aaPredicted RBP13.1□□□□□ -0.31
CDH4-203ENST00000614565 DET1Q7L5Y6 550 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 KDM4CQ9H3R0 1056 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
CDH4-203ENST00000614565 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH4-203ENST00000614565 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
CDH4-203ENST00000614565 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
CDH4-203ENST00000614565 WTIPA6NIX2 430 aaPredicted RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
CDH4-203ENST00000614565 EFCAB14O75071 495 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms