RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PRRG1O14668 218 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 LSM8O95777 96 aaKnown RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 SETSIPP0DME0 302 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 HAPLN1P10915 354 aaPredicted RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 NPR3P17342 541 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CHRNB2P17787 502 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 FECHP22830 423 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CYP2F1P24903 491 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 SSTR3P32745 418 aaPredicted RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 EIF4A3P38919 411 aaKnown RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 GRIK1P39086 918 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CLCN4P51793 760 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CDR1P51861 262 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 RPL10AP62906 217 aaKnown RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 FMO1Q01740 532 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 BST2Q10589 180 aaKnown RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 MGAT5BQ3V5L5 792 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CCDC149Q6ZUS6 474 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 RTL10Q7L3V2 364 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 RBM23Q86U06 439 aaKnown RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 TTC30AQ86WT1 665 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 LRRC8AQ8IWT6 810 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 TCEAL8Q8IYN2 117 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 TMEM35BQ8NCS4 154 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 UBA3Q8TBC4 463 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 HDAC7Q8WUI4 952 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 CHP1Q99653 195 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 SYT11Q9BT88 431 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.56■□□□□ 0.08
CD48-203ENST00000613788 NHEJ1Q9H9Q4 299 aaPredicted RBP15.56■□□□□ 0.08
CD48-203ENST00000613788 CSNK1G1Q9HCP0 422 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 KRT82Q9NSB4 513 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 SLC27A5Q9Y2P5 690 aa15.56■□□□□ 0.08
CD48-203ENST00000613788 TRIOBPQ9H2D6 2365 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 TRIM66O15016 1216 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 PER2O15055 1255 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 VNN2O95498 520 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 PLEKP08567 350 aaPredicted RBP15.55■□□□□ 0.08
CD48-203ENST00000613788 CFHP08603 1231 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 POU3F3P20264 500 aaPredicted RBP15.55■□□□□ 0.08
CD48-203ENST00000613788 GPD2P43304 727 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 NRIP1P48552 1158 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 MAP3K7CLP57077 242 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 DUSP6Q16828 381 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 PKDCCQ504Y2 493 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 DENND1BQ6P3S1 775 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 ADGRD2Q7Z7M1 963 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 SCN4BQ8IWT1 228 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 CCDC170Q8IYT3 715 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 KREMEN2Q8NCW0 462 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 NOX5Q96PH1 765 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 GAS2L1Q99501 681 aaPredicted RBP15.55■□□□□ 0.08
CD48-203ENST00000613788 SEPT5Q99719 369 aaPredicted RBP15.55■□□□□ 0.08
CD48-203ENST00000613788 UBXN6Q9BZV1 441 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 PLEKHA4Q9H4M7 779 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 DMAP1Q9NPF5 467 aaPredicted RBP15.55■□□□□ 0.08
CD48-203ENST00000613788 ADAMTS1Q9UHI8 967 aa15.55■□□□□ 0.08
CD48-203ENST00000613788 AKR1B10O60218 316 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SEC24AO95486 1093 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SPATA31D3P0C874 917 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 CDH5P33151 784 aaPredicted RBP15.54■□□□□ 0.08
CD48-203ENST00000613788 ALDH1A3P47895 512 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SNX16P57768 344 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 PDE4CQ08493 712 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 LIN9Q5TKA1 542 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 PPP1R2P3Q6NXS1 205 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 CLEC20AQ6ZU45 233 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SPATA31D4Q6ZUB0 917 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 PASD1Q8IV76 773 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 STK32AQ8WU08 396 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SLC22A17Q8WUG5 538 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SLC35F5Q8WV83 523 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SECISBP2LQ93073 1101 aaKnown RBP15.54■□□□□ 0.08
CD48-203ENST00000613788 C8orf48Q96LL4 319 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 CEP295NLQ96MC4 621 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 SMOQ99835 787 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 FBXW11Q9UKB1 542 aa15.54■□□□□ 0.08
CD48-203ENST00000613788 F8VP50 259 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 DDX3XO00571 662 aaKnown RBP eCLIP15.53■□□□□ 0.08
CD48-203ENST00000613788 XPO1O14980 1071 aaKnown RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 CYP1A1P04798 512 aaPredicted RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 GZMAP12544 262 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 IGFBP4P22692 258 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
CD48-203ENST00000613788 PLD1Q13393 1074 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 CLEC16AQ2KHT3 1053 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 WDTC1Q8N5D0 677 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 TTC9BQ8N6N2 239 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 MSANTD4Q8NCY6 345 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 SLC30A5Q8TAD4 765 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 KCNK16Q96T55 309 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 PNPLA8Q9NP80 782 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 MTCH2Q9Y6C9 303 aa15.53■□□□□ 0.08
CD48-203ENST00000613788 BEST1O76090 585 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms