RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CHMP1AQ9HD42 196 aaPredicted RBP11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SOHLH2Q9NX45 425 aa11.24□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FOXN1O15353 648 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 AKAP8O43823 692 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TADA2AO75478 443 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PLOD1Q02809 727 aaPredicted RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TRPC4APQ8TEL6 797 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BHMT2Q9H2M3 363 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SMARCAL1Q9NZC9 954 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 WRBO00258 174 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PDCD5O14737 125 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SMCO1Q147U7 214 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PADI6Q6TGC4 694 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 OR7G1Q8NGA0 311 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PTPN6P29350 595 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TUBB2AQ13885 445 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PDZK1Q5T2W1 519 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TUBB2BQ9BVA1 445 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ABCG4Q9H172 646 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 KLHL20Q9Y2M5 609 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SAC3D1A6NKF1 404 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BTN3A3O00478 584 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PPM1BO75688 479 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CHKAP35790 457 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 BEND5Q7L4P6 421 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PYROXD1Q8WU10 500 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SNRNP27Q8WVK2 155 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZSCAN10Q96SZ4 725 aaPredicted RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 NDUFS2O75306 463 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RCVRNP35243 200 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF844Q08AG5 666 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF235Q14590 738 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 LSM14AQ8ND56 463 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ACTR10Q9NZ32 417 aa11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TDRKHQ9Y2W6 561 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ATP13A5Q4VNC0 1218 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 DPF2Q92785 391 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 OSBPL9Q96SU4 736 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 AP4S1Q9Y587 144 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TRIM66O15016 1216 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 IGFBP1P08833 259 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CTCFP49711 727 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PTK2Q05397 1052 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TXNDC11Q6PKC3 985 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 JAMLQ86YT9 394 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MRPL48Q96GC5 212 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 REV1Q9UBZ9 1251 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RRP15Q9Y3B9 282 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CXCR5P32302 372 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CTNNB1P35222 781 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PITRM1Q5JRX3 1037 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RSBN1Q5VWQ0 802 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CCDC86Q9H6F5 360 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SEC31BQ9NQW1 1179 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SH3GLB2Q9NR46 395 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SUCOQ9UBS9 1254 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ACADSP16219 412 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CNTN1Q12860 1018 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FAM26FQ5R3K3 315 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 SPATA2LQ8IUW3 424 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZNF671Q8TAW3 534 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MED8Q96G25 268 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PCDHGA6Q9Y5G7 932 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 MAGED1Q9Y5V3 778 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TPPPO94811 219 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 S100A2P29034 98 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 RAPSNQ13702 412 aa11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-211ENST00000612828 LRRC6Q86X45 466 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms