RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 SUSD3Q96L08 255 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 SYT15Q9BQS2 421 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 CRTAC1Q9NQ79 661 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 CDH9Q9ULB4 789 aa12.98□□□□□ -0.33
CBWD1-220ENST00000612045 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
CBWD1-220ENST00000612045 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM189-UBE2V1I3L0A0 370 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PGRMC1O00264 195 aaKnown RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PIK3R2O00459 728 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 HOXA2O43364 376 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PCSK1P29120 753 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 OR1G1P47890 313 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 GATMP50440 423 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 SNX16P57768 344 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 OGDHQ02218 1023 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PAQR9Q6ZVX9 377 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 RTP3Q9BQQ7 232 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 EPC1Q9H2F5 836 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 METTL5Q9NRN9 209 aaKnown RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 TSC2P49815 1807 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 MYBPHLA2RUH7 354 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 CLDN5O00501 218 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 CAPN15O75808 1086 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 RWDD2BP57060 319 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 ZNF211Q13398 564 aaPredicted RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 FAM102AQ5T9C2 384 aaPredicted RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 DAB2IPQ5VWQ8 1189 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 CNKSR3Q6P9H4 555 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 NECAB2Q7Z6G3 386 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 JOSD2Q8TAC2 188 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 FNIP1Q8TF40 1166 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 ANKRD7Q92527 254 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 RBM12Q9NTZ6 932 aaKnown RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
CBWD1-220ENST00000612045 PRG3Q9Y2Y8 225 aaPredicted RBP12.97□□□□□ -0.33
CBWD1-220ENST00000612045 F8VP50 259 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.33
CBWD1-220ENST00000612045 GABBR2O75899 941 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 FGGP02679 453 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 NPR3P17342 541 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 TYMPP19971 482 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 RFC2P35250 354 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 PLA2G4AP47712 749 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 RPL34P49207 117 aaKnown RBP12.96□□□□□ -0.33
CBWD1-220ENST00000612045 SLC8A3P57103 927 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 IKBKEQ14164 716 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 OVOS1Q6IE37 1185 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 MMGT1Q8N4V1 131 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 EMC1Q8N766 993 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 MYCBPAPQ8TBZ2 947 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 PCED1BQ96HM7 432 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 HSFY1Q96LI6 401 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 B3GNT5Q9BYG0 378 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 CYLDQ9NQC7 956 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 TMEM59LQ9UK28 342 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.33
CBWD1-220ENST00000612045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
CBWD1-220ENST00000612045 MICAL3Q7RTP6 2002 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PYGMP11217 842 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 CAPN2P17655 700 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PSMA2P25787 234 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TAS2R40P59535 323 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 OLFML1Q6UWY5 402 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 ZDHHC17Q8IUH5 632 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PIWIL1Q96J94 861 aaKnown RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TRIM43BA6NCK2 446 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TBKBP1A7MCY6 615 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 NRP1O14786 923 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TADA2AO75478 443 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 BEST1O76090 585 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TIMP1P01033 207 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms