RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 C4orf50Q6ZRC1 276 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 ARID3BQ8IVW6 561 aaPredicted RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 LRRC71Q8N4P6 559 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 PHC3Q8NDX5 983 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 USP6NLQ92738 828 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 FBXL18Q96ME1 805 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 MAD1L1Q9Y6D9 718 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 ZNFX1Q9P2E3 1918 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 TBX10O75333 385 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 RBP3P10745 1247 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 GNAT1P11488 350 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 MMP8P22894 467 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 GMPRP36959 345 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 LMNB2Q03252 620 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 MORF4L2Q15014 288 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 DARS2Q6PI48 645 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 CFAP61Q8NHU2 1237 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 ATP6V0A1Q93050 837 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 SMYD3Q9H7B4 428 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 FOCADQ5VW36 1801 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 B2RBV5 119 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 H7C0C1 242 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 ATP5OP48047 213 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 EIF3EP60228 445 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 PSMC1P62191 440 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 TRPC3Q13507 836 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 PDIK1LQ8N165 341 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 ATP11CQ8NB49 1132 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 SPATA18Q8TC71 538 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 TTC25Q96NG3 672 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 SPATS2LQ9NUQ6 558 aaKnown RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 RNF19AQ9NV58 838 aa21.38■■□□□ 1.01
SSBP3-216ENST00000610401 MAGED2Q9UNF1 606 aaPredicted RBP21.38■■□□□ 1.01
SSBP3-216ENST00000610401 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 PRPF4O43172 522 aaKnown RBP eCLIP21.37■■□□□ 1.013e-6■■■□□ 17
SSBP3-216ENST00000610401 KRT3P12035 628 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 SP2Q02086 613 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 CCDC62Q6P9F0 684 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 ENOSF1Q7L5Y1 443 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 TSC22D3Q99576 134 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 TAS2R1Q9NYW7 299 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.37■■□□□ 1.01
SSBP3-216ENST00000610401 OASLQ15646 514 aaKnown RBP21.37■■□□□ 1.01
SSBP3-216ENST00000610401 UBA3Q8TBC4 463 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 THTPAQ9BU02 230 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 ASCC2Q9H1I8 757 aaPredicted RBP21.37■■□□□ 1.01
SSBP3-216ENST00000610401 ANKEF1Q9NU02 776 aa21.37■■□□□ 1.01
SSBP3-216ENST00000610401 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 GSC2O15499 205 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 DGAT1O75907 488 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 RGS20O76081 388 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PGM1P36871 562 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 TMPRSS15P98073 1019 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 KLC1Q07866 573 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 CCNJLQ8IV13 435 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 WDTC1Q8N5D0 677 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 CCDC124Q96CT7 223 aaKnown RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 SLC17A6Q9P2U8 582 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 LUC7L3O95232 432 aaKnown RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PHBP35232 272 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 TEKT4Q8WW24 435 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 MMP19Q99542 508 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PACSIN3Q9UKS6 424 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 ZNRF3Q9ULT6 936 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 ACTL7BQ9Y614 415 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 TRIM49D1C9J1S8 452 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 SKIV2L2P42285 1042 aaKnown RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 NEK3P51956 506 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PSMD6Q15008 389 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PARP6Q2NL67 630 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 MROH9Q5TGP6 573 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 RSBN1LQ6PCB5 846 aaPredicted RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 POU5F2Q8N7G0 328 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 PDGFDQ9GZP0 370 aaPredicted RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 RAB6BQ9NRW1 208 aa21.36■■□□□ 1.01
SSBP3-216ENST00000610401 CORO1CQ9ULV4 474 aaPredicted RBP21.36■■□□□ 1.01
SSBP3-216ENST00000610401 FCHO1O14526 889 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 PTPN20Q4JDL3 420 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 TRIM50Q86XT4 487 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 BTBD10Q9BSF8 475 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 ST6GALNAC4Q9H4F1 302 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 MYH9P35579 1960 aaKnown RBP21.35■■□□□ 1.01
SSBP3-216ENST00000610401 TCRBV9S1A1TA0A576 114 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 CXorf49A8MYA2 514 aaPredicted RBP21.35■■□□□ 1.01
SSBP3-216ENST00000610401 CCDC22O60826 627 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 ATP5HO75947 161 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 PSAPP07602 524 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 ATP6V1C1P21283 382 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 PEX6Q13608 980 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 PPIL6Q8IXY8 311 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 ARFGAP1Q8N6T3 406 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 TMEM35BQ8NCS4 154 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 FAF2Q96CS3 445 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 NSL1Q96IY1 281 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 ACSS2Q9NR19 701 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 IL1RAPL1Q9NZN1 696 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 CYTH4Q9UIA0 394 aa21.35■■□□□ 1.01
SSBP3-216ENST00000610401 PPP1R12AO14974 1030 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms