RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 AK8Q96MA6 479 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 EVLQ9UI08 416 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 MMP17Q9ULZ9 603 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 ANKRD63C9JTQ0 380 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 ACAT1P24752 427 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 ZNF131P52739 623 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 MRPS21P82921 87 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 GTF2BQ00403 316 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 INTS6LQ5JSJ4 861 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 SLC39A4Q6P5W5 647 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 ARMCX6Q7L4S7 300 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 RASSF3Q86WH2 238 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 HDDC3Q8N4P3 179 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 MDGA1Q8NFP4 955 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 WHAMMQ8TF30 809 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 LHX6Q9UPM6 363 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 AGAP1Q9UPQ3 857 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 NEUROG3Q9Y4Z2 214 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 LAMA1P25391 3075 aa18.62■□□□□ 0.57
CHMP4A-211ENST00000609024 OBSL1O75147 1896 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 ITGB3P05106 788 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 KRT19P08727 400 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 PCSK1P29120 753 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 POLR2BP30876 1174 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 CRY1Q16526 586 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 C4orf50Q6ZRC1 276 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 SYT12Q8IV01 421 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 SPATA18Q8TC71 538 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 GATA6Q92908 595 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 SLC22A12Q96S37 553 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 LINC00597Q9H2U6 94 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 ARHGAP26Q9UNA1 814 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 WASF3Q9UPY6 502 aa18.61■□□□□ 0.57
CHMP4A-211ENST00000609024 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 H3BQV1 296 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 K7EQS6 105 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 TNFRSF10BO14763 440 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 HYAL3O43820 417 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 TADA3O75528 432 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 CFIP05156 583 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 ANXA13P27216 316 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 LHX1P48742 406 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 SIM1P81133 766 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 MCM6Q14566 821 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 ZC2HC1CQ53FD0 456 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 LRSAM1Q6UWE0 723 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 TMEFF1Q8IYR6 380 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 ABCA7Q8IZY2 2146 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 FUBP3Q96I24 572 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 TRPM5Q9NZQ8 1165 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 EXOC7Q9UPT5 735 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 IGF2RP11717 2491 aa18.6■□□□□ 0.57
CHMP4A-211ENST00000609024 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 TISP43B9A030 160 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 SLC9A3R1O14745 358 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 APODP05090 189 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 HOXB3P14651 431 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 ENGP17813 658 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 TIE1P35590 1138 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 CFAP221Q4G0U5 840 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 HSF5Q4G112 596 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 EOGTQ5NDL2 527 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 LYSMD4Q5XG99 296 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 ADGRF2Q8IZF7 708 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 CSGALNACT2Q8N6G5 542 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 ALLCQ8N6M5 410 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 TXNDC5Q8NBS9 432 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 NOC3LQ8WTT2 800 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 RLN3Q8WXF3 142 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 FAM213AQ9BRX8 229 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 GTPBP2Q9BX10 602 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 TMEM121BQ9BXQ6 578 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 SNX9Q9Y5X1 595 aa18.59■□□□□ 0.57
CHMP4A-211ENST00000609024 H0Y626 953 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 ZBTB24O43167 697 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 TRIM16O95361 564 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 KLF8O95600 359 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 ABL1P00519 1130 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 TCF3P15923 654 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 PFKLP17858 780 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 GRIK1P39086 918 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 OPRD1P41143 372 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 RING1Q06587 406 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 LRRC52Q8N7C0 313 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 HMGB4Q8WW32 186 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 RAD54LQ92698 747 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 PNKPQ96T60 521 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 GCNT4Q9P109 453 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 MSRB2Q9Y3D2 182 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 STYXL1Q9Y6J8 313 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 MYO16Q9Y6X6 1858 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 KIAA1549LQ6ZVL6 1849 aa18.58■□□□□ 0.56
CHMP4A-211ENST00000609024 SPAARA0A1B0GVQ0 90 aa18.57■□□□□ 0.56
CHMP4A-211ENST00000609024 LEFTY2O00292 366 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms