RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 PSMC1P62191 440 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 NAIF1Q69YI7 327 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 C4orf50Q6ZRC1 276 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 LIMS2Q7Z4I7 341 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 ARL14EPQ8N8R7 260 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 FSIP1Q8NA03 581 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 RDH13Q8NBN7 331 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 NETO1Q8TDF5 533 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 KBTBD7Q8WVZ9 684 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 P2RY13Q9BPV8 354 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 TNMDQ9H2S6 317 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 DUS2Q9NX74 493 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 GCNT4Q9P109 453 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 CDH9Q9ULB4 789 aa14.33□□□□□ -0.12
POLR2J3-219ENST00000608621 CCDC163A0A0D9SF12 145 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 C2orf78A6NCI8 922 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 HDCP19113 662 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 BDNFP23560 247 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 GRIK1P39086 918 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 IFNAR2P48551 515 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 AMPD3Q01432 767 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF77Q15935 545 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 E2F4Q16254 413 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 GAB3Q8WWW8 586 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 EXOC4Q96A65 974 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 MMS19Q96T76 1030 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 TRIM9Q9C026 710 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 ARRDC1-AS1Q9H2J1 176 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 LINC00597Q9H2U6 94 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 WNT6Q9Y6F9 365 aa14.32□□□□□ -0.12
POLR2J3-219ENST00000608621 ANAPC1Q9H1A4 1944 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CLIC2O15247 247 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 TGFB1I1O43294 461 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 PPP6R2O75170 966 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 RPP40O75818 363 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 WARSP23381 471 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 ASIC1P78348 528 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 NR1H3Q13133 447 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 EML3Q32P44 896 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 FBXO43Q4G163 708 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 VSTM1Q6UX27 236 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 EPM2AIP1Q7L775 607 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CACNA2D4Q7Z3S7 1137 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 KBTBD6Q86V97 674 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CAMKK1Q8N5S9 505 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 SH3RF2Q8TEC5 729 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CD101Q93033 1021 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 DHX58Q96C10 678 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CNTNAP3BQ96NU0 1288 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CNTNAP3Q9BZ76 1288 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
POLR2J3-219ENST00000608621 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 TNNI1P19237 187 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 GNL1P36915 607 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 USP46P62068 366 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 USP4Q13107 963 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 PSMD2Q13200 908 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 KCNB1Q14721 858 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 SF3A2Q15428 464 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 MAPRE1Q15691 268 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 CCDC6Q16204 474 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 SNRNP35Q16560 246 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 FAM26FQ5R3K3 315 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 IQUBQ8NA54 791 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 RPLP0P6Q8NHW5 317 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 EZH1Q92800 747 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 ATP2A3Q93084 1043 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 PCED1BQ96HM7 432 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 LOXL4Q96JB6 756 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 SNX25Q9H3E2 840 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 TRPM5Q9NZQ8 1165 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 GREB1Q4ZG55 1949 aa14.3□□□□□ -0.12
POLR2J3-219ENST00000608621 SPAG17Q6Q759 2223 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 CUTAO60888 179 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF806P0C7X5 589 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 TCF3P15923 654 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 ANXA13P27216 316 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 CYP2J2P51589 502 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms