RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 MSANTD3Q96H12 275 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 ZFYVE19Q96K21 471 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 ELOVL4Q9GZR5 314 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 C8orf33Q9H7E9 229 aaPredicted RBP20.48■□□□□ 0.87
CTSA-217ENST00000607482 TDP1Q9NUW8 608 aa20.48■□□□□ 0.87
CTSA-217ENST00000607482 PIEZO1Q92508 2521 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 SOBPA7XYQ1 873 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 PRAMEF12O95522 483 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 ABL1P00519 1130 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 F11P03951 625 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 C4BPAP04003 597 aaKnown RBP20.47■□□□□ 0.87
CTSA-217ENST00000607482 CCNE1P24864 410 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 TARSP26639 723 aaKnown RBP20.47■□□□□ 0.87
CTSA-217ENST00000607482 WEE1P30291 646 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 PDE6CP51160 858 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 CLDN10P78369 228 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 DENND5BQ6ZUT9 1274 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 FMR1NBQ8N0W7 255 aaPredicted RBP20.47■□□□□ 0.87
CTSA-217ENST00000607482 B3GALNT2Q8NCR0 500 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 PLEKHO2Q8TD55 490 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 TAF4BQ92750 862 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 MKNK1Q9BUB5 465 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 XYLT2Q9H1B5 865 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 SMYD3Q9H7B4 428 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 KIF9Q9HAQ2 790 aa20.47■□□□□ 0.87
CTSA-217ENST00000607482 CETN3O15182 167 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 MAPK13O15264 365 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 USP17L7P0C7H9 530 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 NBL1P41271 181 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 RAP1GAPP47736 663 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 CDH8P55286 799 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 IFRD2Q12894 506 aaPredicted RBP20.46■□□□□ 0.87
CTSA-217ENST00000607482 PPP2R5DQ14738 602 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 SV2AQ7L0J3 742 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 SMYD4Q8IYR2 804 aaPredicted RBP20.46■□□□□ 0.87
CTSA-217ENST00000607482 SPATA17Q96L03 361 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 MYRFLQ96LU7 910 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 CEP295NLQ96MC4 621 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 GTPBP4Q9BZE4 634 aaKnown RBP20.46■□□□□ 0.87
CTSA-217ENST00000607482 GZF1Q9H116 711 aaPredicted RBP20.46■□□□□ 0.87
CTSA-217ENST00000607482 DPEP3Q9H4B8 488 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.46■□□□□ 0.87
CTSA-217ENST00000607482 TRPM5Q9NZQ8 1165 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 DLGAP2Q9P1A6 1054 aa20.46■□□□□ 0.87
CTSA-217ENST00000607482 F8VP50 259 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
CTSA-217ENST00000607482 AKAP3O75969 853 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
CTSA-217ENST00000607482 GCLMP48507 274 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 AMPD2Q01433 879 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 CSTF1Q05048 431 aaKnown RBP20.45■□□□□ 0.86
CTSA-217ENST00000607482 STIM1Q13586 685 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 LRRC32Q14392 662 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 NFIL3Q16649 462 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 ITPRIPL2Q3MIP1 535 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 ZACNQ401N2 412 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 TMEM150AQ86TG1 271 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 GSDMAQ96QA5 445 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 VRTNQ9H8Y1 702 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 LMAN1LQ9HAT1 526 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 GKN1Q9NS71 199 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 GTSE1Q9NYZ3 720 aa20.45■□□□□ 0.86
CTSA-217ENST00000607482 CACNA1HO95180 2353 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 STX10O60499 249 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 HLA-DRAP01903 254 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 TRIM49P0CI25 452 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 TRIM49CP0CI26 452 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 HDCP19113 662 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 RPS9P46781 194 aaKnown RBP20.44■□□□□ 0.86
CTSA-217ENST00000607482 MLLT6P55198 1093 aaPredicted RBP20.44■□□□□ 0.86
CTSA-217ENST00000607482 ZNF658Q5TYW1 1059 aaPredicted RBP20.44■□□□□ 0.86
CTSA-217ENST00000607482 RALGPS2Q86X27 583 aaPredicted RBP20.44■□□□□ 0.86
CTSA-217ENST00000607482 USP13Q92995 863 aaPredicted RBP20.44■□□□□ 0.86
CTSA-217ENST00000607482 ELMO3Q96BJ8 720 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 C8orf48Q96LL4 319 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 SLITRK1Q96PX8 696 aa20.44■□□□□ 0.86
CTSA-217ENST00000607482 SPECC1L-ADORA2AF8WAN1 911 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 VNN1O95497 513 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 SP9P0CG40 484 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 SOX9P48436 509 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 PPP3CCP48454 512 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 EDRF1Q3B7T1 1238 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 ACOT1Q86TX2 421 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 ATRIPQ8WXE1 791 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 EXOC4Q96A65 974 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 CLDN23Q96B33 292 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 LRRC3BQ96PB8 259 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 CYP2S1Q96SQ9 504 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 B3GNT5Q9BYG0 378 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 ZNF518BQ9C0D4 1074 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 CCL26Q9Y258 94 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 R4GN57 208 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 NCANO14594 1321 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 MIA3Q5JRA6 1907 aa20.43■□□□□ 0.86
CTSA-217ENST00000607482 PROB1E7EW31 1015 aa20.42■□□□□ 0.86
CTSA-217ENST00000607482 CLDN5O00501 218 aa20.42■□□□□ 0.86
CTSA-217ENST00000607482 IFNAR2P48551 515 aa20.42■□□□□ 0.86
CTSA-217ENST00000607482 TNK2Q07912 1038 aa20.42■□□□□ 0.86
CTSA-217ENST00000607482 TCERG1LQ5VWI1 586 aa20.42■□□□□ 0.86
CTSA-217ENST00000607482 ARL14EPQ8N8R7 260 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms