RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SHDQ96IW2 340 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 C8orf48Q96LL4 319 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 KXD1Q9BQD3 176 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 NUP62CLQ9H1M0 184 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 MMRN2Q9H8L6 949 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 RAB20Q9NX57 234 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 OBP2AQ9NY56 170 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 CTNND2Q9UQB3 1225 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 COQ4Q9Y3A0 265 aa20.46■□□□□ 0.87
SRSF4-206ENST00000605204 BDNFP23560 247 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 GRIK1P39086 918 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 CDH8P55286 799 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 NLRP12P59046 1061 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 CETN1Q12798 172 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 CCDC40Q4G0X9 1142 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 CRYBG2Q8N1P7 616 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 MRPS31Q92665 395 aaKnown RBP20.45■□□□□ 0.86
SRSF4-206ENST00000605204 DNASE1L2Q92874 299 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 SLC35C1Q96A29 364 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 DUSP9Q99956 384 aaKnown RBP20.45■□□□□ 0.86
SRSF4-206ENST00000605204 ARHGEF3Q9NR81 526 aa20.45■□□□□ 0.86
SRSF4-206ENST00000605204 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 SLC38A8A6NNN8 435 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 CFHP08603 1231 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 GJA1P17302 382 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 PFKLP17858 780 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 PPP3CCP48454 512 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 PDE6CP51160 858 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 CLCN5P51795 746 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 MARSP56192 900 aaKnown RBP20.44■□□□□ 0.86
SRSF4-206ENST00000605204 CCDC142Q17RM4 750 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 GPR158Q5T848 1215 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 TANGO2Q6ICL3 276 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 DENND5BQ6ZUT9 1274 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 SIX5Q8N196 739 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 GPR152Q8TDT2 470 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 ZSWIM3Q96MP5 696 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 RPP25Q9BUL9 199 aaKnown RBP20.44■□□□□ 0.86
SRSF4-206ENST00000605204 TRMT61BQ9BVS5 477 aaKnown RBP20.44■□□□□ 0.86
SRSF4-206ENST00000605204 SDCBP2Q9H190 292 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 DPEP3Q9H4B8 488 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 TRPV5Q9NQA5 729 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 DACH1Q9UI36 760 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 RWDD2AQ9UIY3 292 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 NME7Q9Y5B8 376 aa20.44■□□□□ 0.86
SRSF4-206ENST00000605204 P4HA2O15460 535 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 F11P03951 625 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 PSMC3P17980 439 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 RAP1GAPP47736 663 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 GPR15P49685 360 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 NDST1P52848 882 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 GPC5P78333 572 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 PRKCQQ04759 706 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 SPOPLQ6IQ16 392 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 ASCL5Q7RTU5 278 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 IRF7Q92985 503 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 SMARCD1Q96GM5 515 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 TTLL2Q9BWV7 592 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 KIF9Q9HAQ2 790 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 APOBEC3GQ9HC16 384 aaKnown RBP20.43■□□□□ 0.86
SRSF4-206ENST00000605204 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
SRSF4-206ENST00000605204 MAGED2Q9UNF1 606 aaPredicted RBP20.43■□□□□ 0.86
SRSF4-206ENST00000605204 DPYSL4O14531 572 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 CCDC192P0DO97 292 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 RFX1P22670 979 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 CDR1P51861 262 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 YWHAEP62258 255 aaKnown RBP20.42■□□□□ 0.86
SRSF4-206ENST00000605204 CBWD6Q4V339 395 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 CBWD3Q5JTY5 395 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 CBWD5Q5RIA9 395 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 ASTLQ6HA08 431 aaPredicted RBP20.42■□□□□ 0.86
SRSF4-206ENST00000605204 PHLDB3Q6NSJ2 640 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 FAM35AQ86V20 835 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 ARID3BQ8IVW6 561 aaPredicted RBP20.42■□□□□ 0.86
SRSF4-206ENST00000605204 MFSD6LQ8IWD5 586 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 B3GNT5Q9BYG0 378 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 ZNF518BQ9C0D4 1074 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 DMAP1Q9NPF5 467 aaPredicted RBP20.42■□□□□ 0.86
SRSF4-206ENST00000605204 SPTBN4Q9H254 2564 aa20.42■□□□□ 0.86
SRSF4-206ENST00000605204 F8VP50 259 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 NRG2O14511 850 aaPredicted RBP20.41■□□□□ 0.86
SRSF4-206ENST00000605204 TBXAS1P24557 533 aaPredicted RBP20.41■□□□□ 0.86
SRSF4-206ENST00000605204 AVPR1AP37288 418 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 POTEHQ6S545 545 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 TMEM150AQ86TG1 271 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 ACOT1Q86TX2 421 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 MON1AQ86VX9 555 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 MED10Q9BTT4 135 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 BRD9Q9H8M2 597 aa20.41■□□□□ 0.86
SRSF4-206ENST00000605204 HEPACAM2A8MVW5 462 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 CILPO75339 1184 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 RTN3O95197 1032 aaPredicted RBP20.4■□□□□ 0.86
SRSF4-206ENST00000605204 FMO5P49326 533 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 CYP4F8P98187 520 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 FCHO2Q0JRZ9 810 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 CT47A1Q5JQC4 288 aaPredicted RBP20.4■□□□□ 0.86
SRSF4-206ENST00000605204 STXBP5Q5T5C0 1151 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 SDHAF4Q5VUM1 108 aa20.4■□□□□ 0.86
SRSF4-206ENST00000605204 C1orf228Q6PIY5 440 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms