RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LRRN4CLQ8ND94 238 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RNPC3Q96LT9 517 aaKnown RBP12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CASD1Q96PB1 797 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■■ 42.9
NEDD8-MDP1-203ENST00000604306 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 INPP5FQ9Y2H2 1132 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GREB1Q4ZG55 1949 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GOLGA6L10A0A0M3HER8 536 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ABHD14A-ACY1A0A1B0GW23 586 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CEP104O60308 925 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FBXO21O94952 628 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OAZ2O95190 189 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PCK1P35558 622 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CETN2P41208 172 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZNF143P52747 638 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLC6A3Q01959 620 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RNASELQ05823 741 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PDE4CQ08493 712 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 IKBKEQ14164 716 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OVOS1Q6IE37 1185 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 OLFML1Q6UWY5 402 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FUKQ8N0W3 1084 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 EXD1Q8NHP7 514 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLC2A14Q8TDB8 520 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ALG3Q92685 438 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PKMYT1Q99640 499 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TMEM106CQ9BVX2 250 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CSNK1G1Q9HCP0 422 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM49BQ9NUQ9 324 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 EFR3BQ9Y2G0 817 aa12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZNF638Q14966 1978 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CCDC151A5D8V7 595 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 E5RJQ4 531 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 BAIAP3O94812 1187 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DDHD2O94830 711 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TIMP1P01033 207 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KRT7P08729 469 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PDGFRBP09619 1106 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM200BP0CF97 657 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 H2AFXP16104 143 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PTPN9P43378 593 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LBX1P52954 281 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TSPY1Q01534 308 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SMARCB1Q12824 385 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 BRD3Q15059 726 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HADHQ16836 314 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM102AQ5T9C2 384 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CYP4A22Q5TCH4 519 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 EIF1ADQ8N9N8 165 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 UBA3Q8TBC4 463 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■■■□□ 18.4
NEDD8-MDP1-203ENST00000604306 KRT35Q92764 455 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PSMB7Q99436 277 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CNPY3Q9BT09 278 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CRTAC1Q9NQ79 661 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 METTL5Q9NRN9 209 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SF3B1O75533 1304 aaKnown RBP eCLIP12.92□□□□□ -0.344e-7■■■■■ 86.2
NEDD8-MDP1-203ENST00000604306 C2CD4BA6NLJ0 364 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FSCN2O14926 492 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RNF8O76064 485 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CCDC130P13994 396 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GPD1P21695 349 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PSMA2P25787 234 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TNFRSF8P28908 595 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TKTP29401 623 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RFC1P35251 1148 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 YWHAHQ04917 246 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CYP1B1Q16678 543 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 C2CD6Q53TS8 623 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 RAB41Q5JT25 222 aa12.92□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms