RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 CCDC127Q96BQ5 260 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 FNBP1Q96RU3 617 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 MMS19Q96T76 1030 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
HCG18-247ENST00000602698 SLC39A2Q9NP94 309 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 CRTAC1Q9NQ79 661 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 HPS4Q9NQG7 708 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 GKN1Q9NS71 199 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
HCG18-247ENST00000602698 CFAP45Q9UL16 551 aa10.24□□□□□ -0.77
HCG18-247ENST00000602698 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 OTOL1A6NHN0 477 aaPredicted RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 K7ESF4 209 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 KLRC4O43908 158 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 TACC1O75410 805 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 STAU1O95793 577 aaKnown RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 PDGFRBP09619 1106 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SLFN14P0C7P3 912 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 BDNFP23560 247 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 FOXK2Q01167 660 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 FAM160A1Q05DH4 1040 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 USP4Q13107 963 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 RUNX3Q13761 415 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 ZNF77Q15935 545 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 KNOP1Q1ED39 458 aaKnown RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 VSTM1Q6UX27 236 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 ERMP1Q7Z2K6 904 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 CEP57L1Q8IYX8 460 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SYNPOQ8N3V7 929 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SECISBP2LQ93073 1101 aaKnown RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 RMDN1Q96DB5 314 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 CHFRQ96EP1 664 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SPATA17Q96L03 361 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SLC22A12Q96S37 553 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 MRPL45Q9BRJ2 306 aaKnown RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 EBF3Q9H4W6 596 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 TRPC7Q9HCX4 862 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 MAGEC2Q9UBF1 373 aaPredicted RBP10.23□□□□□ -0.77
HCG18-247ENST00000602698 SERTAD1Q9UHV2 236 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 RCOR1Q9UKL0 485 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 NME7Q9Y5B8 376 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 LAMA1P25391 3075 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
HCG18-247ENST00000602698 TRAV19A0A0A6YYK7 116 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 C2orf78A6NCI8 922 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 TRIM66O15016 1216 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 EXOC3O60645 756 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 CKMP06732 381 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 FAM163BP0C2L3 166 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 USP17L7P0C7H9 530 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 ARSAP15289 507 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 CASP4P49662 377 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 TNNC1P63316 161 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 CYP27A1Q02318 531 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 DMWDQ09019 674 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 MTF1Q14872 753 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 PDGFRLQ15198 375 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 WDR72Q3MJ13 1102 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 TMEM196Q5HYL7 178 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 MDH1BQ5I0G3 518 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
HCG18-247ENST00000602698 FSIP1Q8NA03 581 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 KIAA0895Q8NCT3 520 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 GOLGA5Q8TBA6 731 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 MYCBPAPQ8TBZ2 947 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 PCED1BQ96HM7 432 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 CEP295NLQ96MC4 621 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 XYLT2Q9H1B5 865 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 SNX25Q9H3E2 840 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 EXOC1Q9NV70 894 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
HCG18-247ENST00000602698 NUP205Q92621 2012 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 MYO18AQ92614 2054 aaKnown RBP10.21□□□□□ -0.77
HCG18-247ENST00000602698 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
HCG18-247ENST00000602698 TCF3P15923 654 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 PFKFB1P16118 471 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 ANXA13P27216 316 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 ATICP31939 592 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 GNL1P36915 607 aaPredicted RBP10.21□□□□□ -0.77
HCG18-247ENST00000602698 GRIK1P39086 918 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 FNTBP49356 437 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 MYL6P60660 151 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 USP46P62068 366 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 GRSF1Q12849 480 aaKnown RBP eCLIP10.21□□□□□ -0.77
HCG18-247ENST00000602698 STK4Q13043 487 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 TRPC3Q13507 836 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 KCNB1Q14721 858 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 TDRD10Q5VZ19 366 aaKnown RBP10.21□□□□□ -0.77
HCG18-247ENST00000602698 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 PKN3Q6P5Z2 889 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 DENND5BQ6ZUT9 1274 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 LONP2Q86WA8 852 aa10.21□□□□□ -0.77
HCG18-247ENST00000602698 CPA6Q8N4T0 437 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms