RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 C2CD2Q9Y426 696 aa10.88□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SPTBN1Q01082 2364 aaKnown RBP10.88□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 COL5A1P20908 1838 aaPredicted RBP10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 A0A087X0B3 334 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 H0YCG3 227 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DPYSL4O14531 572 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ACAT1P24752 427 aaKnown RBP10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 HOXA6P31267 233 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ZXDBP98169 803 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PTPAQ15257 358 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 KYAT1Q16773 422 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ITPRIPL2Q3MIP1 535 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DAB2IPQ5VWQ8 1189 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ARMCX5Q6P1M9 558 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FAM173BQ6P4H8 233 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ITIH5Q86UX2 942 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CD302Q8IX05 232 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PDCL2Q8N4E4 241 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 C1orf127Q8N9H9 656 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 LSM14AQ8ND56 463 aaKnown RBP10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FAM200AQ8TCP9 573 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SAAL1Q96ER3 474 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ASB7Q9H672 318 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CCDC86Q9H6F5 360 aaKnown RBP10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 NME7Q9Y5B8 376 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CLIC4Q9Y696 253 aa10.87□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GOLGA4Q13439 2230 aaKnown RBP10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PLXND1Q9Y4D7 1925 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MYMKA6NI61 221 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 KPNA7A9QM74 516 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SLC26A4O43511 780 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 RNF40O75150 1001 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 EPN2O95208 641 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CDC25CP30307 473 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 POLR2BP30876 1174 aaKnown RBP10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CNR2P34972 360 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 UBA7P41226 1012 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TUFMP49411 452 aaKnown RBP10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 RUNX3Q13761 415 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ZNF77Q15935 545 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DDR2Q16832 855 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GAB4Q2WGN9 574 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ARHGAP15Q53QZ3 475 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TCEAL6Q6IPX3 200 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SPPL2BQ8TCT7 592 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TCEAL3Q969E4 200 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CLIC6Q96NY7 704 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 HHIPQ96QV1 700 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TSPAN18Q96SJ8 248 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TBC1D7Q9P0N9 293 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 KCNG1Q9UIX4 513 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CENPEQ02224 2701 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PTPRBP23467 1997 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CEP192Q8TEP8 1941 aa10.86□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MYO18AQ92614 2054 aaKnown RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GOLGA8IPA6NC78 632 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GOLGA8JA6NMD2 632 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 H3BQV1 296 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TRDMT1O14717 391 aaKnown RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DCLK1O15075 740 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ATP2C2O75185 946 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TBCAO75347 108 aaKnown RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 WISP1O95388 367 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ITGB3P05106 788 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CYP2F1P24903 491 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 LONP1P36776 959 aaKnown RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MESP2Q0VG99 397 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 USP4Q13107 963 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 VEPH1Q14D04 833 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 LMBRD2Q68DH5 695 aaPredicted RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 C1orf228Q6PIY5 440 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CEP68Q76N32 757 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SFTPA1Q8IWL2 248 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 BRSK2Q8IWQ3 736 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 LEO1Q8WVC0 666 aaPredicted RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GAB3Q8WWW8 586 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CYP2S1Q96SQ9 504 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 CBWD1Q9BRT8 395 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FAM213AQ9BRX8 229 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GCNT4Q9P109 453 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 WNT6Q9Y6F9 365 aa10.85□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 ADAMTS9Q9P2N4 1935 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms