RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MTMR10Q9NXD2 777 aa13.41□□□□□ -0.26
CHMP2A-206ENST00000600118 SLC27A5Q9Y2P5 690 aa13.41□□□□□ -0.26
CHMP2A-206ENST00000600118 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 MYO7AQ13402 2215 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 SERPING1P05155 500 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 CFHP08603 1231 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 SPATA31D3P0C874 917 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 FECHP22830 423 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 TUFMP49411 452 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 BCAT1P54687 386 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 FMO1Q01740 532 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 CLEC20AQ6ZU45 233 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 SPATA31D4Q6ZUB0 917 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 EFHBQ8N7U6 833 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 SPC24Q8NBT2 197 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 ZMIZ2Q8NF64 920 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 SMOQ99835 787 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 HAUS4Q9H6D7 363 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
CHMP2A-206ENST00000600118 AP1G2O75843 785 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 BEST1O76090 585 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 GLP2RO95838 553 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 C8AP07357 584 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 MMEP08473 750 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 SETSIPP0DME0 302 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 SKILP12757 684 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 NPR3P17342 541 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 ATF6P18850 670 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 IGFBP4P22692 258 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 ELF1P32519 619 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 GPD2P43304 727 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 CDK17Q00537 523 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 ADAM15Q13444 863 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC7A14Q8TBB6 771 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 KCNK16Q96T55 309 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 MAN1C1Q9NR34 630 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 ARHGAP20Q9P2F6 1191 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 INSL5Q9Y5Q6 135 aa13.39□□□□□ -0.27
CHMP2A-206ENST00000600118 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 F8VP50 259 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 M0QYV0 167 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 TULP2O00295 520 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 PRRG1O14668 218 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 TRIM66O15016 1216 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 LINC01565O15544 149 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 ZMYND10O75800 440 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 SOAT2O75908 522 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 POU2F2P09086 479 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 HOXA9P31269 272 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 GPR15P49685 360 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 PDE4CQ08493 712 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 STK32AQ8WU08 396 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 CASP10Q92851 521 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 SECISBP2LQ93073 1101 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 PNPLA8Q9NP80 782 aa13.38□□□□□ -0.27
CHMP2A-206ENST00000600118 DZANK1Q9NVP4 752 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms