RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 LCMT1Q9UIC8 334 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 ADAM21Q9UKJ8 722 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 GRIN2DO15399 1336 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 M0QZ92 97 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 PTGESO14684 152 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 RPS6KA5O75582 802 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 KRT10P13645 584 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 CST5P28325 142 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 HSD17B3P37058 310 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 KCNA10Q16322 511 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 PKDCCQ504Y2 493 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 MFSD7Q6UXD7 560 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 TMC3Q7Z5M5 1100 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 RCOR2Q8IZ40 523 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 MAIP1Q8WWC4 291 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 RAPGEF5Q92565 580 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 PIWIL1Q96J94 861 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 RUNDC3BQ96NL0 473 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 KPNA7A9QM74 516 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 E5RJQ4 531 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 LRCH4O75427 683 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 ECEL1O95672 775 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 IGFBP6P24592 240 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 IL1R2P27930 398 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 RGS7P49802 495 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 PLTPP55058 493 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 SLC25A11Q02978 314 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 CCSAPQ6IQ19 270 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 PCSK9Q8NBP7 692 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 FBXO25Q8TCJ0 367 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 FNIP1Q8TF40 1166 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 FMO2Q99518 471 aa17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 KIAA0100Q14667 2235 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-216ENST00000598201 KRT14P02533 472 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 LMO2P25791 158 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 MGAT3Q09327 533 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 PMF1Q6P1K2 205 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 ARL8AQ96BM9 186 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 FRMPD3Q5JV73 1810 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 A8MXQ7 604 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 XPOTO43592 962 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 GABBR2O75899 941 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 PDGFRBP09619 1106 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 KRT17Q04695 432 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 DHX9Q08211 1270 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 STILQ15468 1287 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 FAM102AQ5T9C2 384 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 KAZNQ674X7 775 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 TRNP1Q6NT89 227 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 SPOCD1Q6ZMY3 1216 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 FAM183BPQ6ZVS7 135 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 RSPH3Q86UC2 560 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 UNC93AQ86WB7 457 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 LRRC45Q96CN5 670 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 RBM41Q96IZ5 413 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 TSEN34Q9BSV6 310 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 TXLNGYQ9BZA5 131 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 FAM204AQ9H8W3 233 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 AGO3Q9H9G7 860 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 GDAP2Q9NXN4 497 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 CACNG4Q9UBN1 327 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 PLAAQ9Y263 795 aa17.94■□□□□ 0.46
SHKBP1-216ENST00000598201 KBTBD13C9JR72 458 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 DNM1LO00429 736 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 TAF6P49848 677 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 AFF1P51825 1210 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 PPP1R7Q15435 360 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 SMTNL2Q2TAL5 461 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 TTMPQ5BVD1 217 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 LIMS2Q7Z4I7 341 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 GSTCDQ8NEC7 633 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 ZNF560Q96MR9 790 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 PPP1R10Q96QC0 940 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 TSPAN18Q96SJ8 248 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 RUFY1Q96T51 708 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 ZWILCHQ9H900 591 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 FAM105AQ9NUU6 356 aa17.93■□□□□ 0.46
SHKBP1-216ENST00000598201 LRRD1A4D1F6 860 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 C3orf70A6NLC5 250 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 H0YGN5 161 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 OPA1O60313 960 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 CAPN2P17655 700 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 ACLYP53396 1101 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 LILRA4P59901 499 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 CCNG2Q16589 344 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 KCNT1Q5JUK3 1230 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 OR6B2Q6IFH4 312 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 SLC35F5Q8WV83 523 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 LPPQ93052 612 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 NFS1Q9Y697 457 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 hCG_1818297A0A087WSY0 165 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 MOXD2PA6NHM9 499 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 TP73O15350 636 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 PPFIA2O75334 1257 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 CCDC130P13994 396 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms