RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 GIPC2Q8TF65 315 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 CPLX3Q8WVH0 158 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 PRKD2Q9BZL6 878 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 HESX1Q9UBX0 185 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 CD207Q9UJ71 328 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 COG5Q9UP83 839 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.45■■□□□ 1.349e-9■■□□□ 13.5
CHMP2A-204ENST00000597848 TRIM66O15016 1216 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 MED7O43513 233 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 ZNF75DP51815 510 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 VEPH1Q14D04 833 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 TAF12Q16514 161 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 GOLGA7BQ2TAP0 167 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 SPECC1LQ69YQ0 1117 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 CES5AQ6NT32 575 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 VSTM4Q8IW00 320 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 CMASQ8NFW8 434 aaPredicted RBP23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 GPR152Q8TDT2 470 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 SMG7Q92540 1137 aaKnown RBP23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 IQCDQ96DY2 449 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 MSLNLQ96KJ4 702 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 ZNF512Q96ME7 567 aaPredicted RBP23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 EDEM3Q9BZQ6 932 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 TSPAN16Q9UKR8 245 aa23.44■■□□□ 1.34
CHMP2A-204ENST00000597848 ITIH6Q6UXX5 1313 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 F8VP50 259 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 O00370 1275 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 ATF6P18850 670 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 SSTR3P32745 418 aaPredicted RBP23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 CACNA2D1P54289 1103 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 ARID5AQ03989 594 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 STILQ15468 1287 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 CNGA2Q16280 664 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 FIGNQ5HY92 759 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 SLC47A2Q86VL8 602 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 ZNF606Q8WXB4 792 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 ZNF707Q96C28 371 aaPredicted RBP23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 KCNK16Q96T55 309 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 ZSWIM1Q9BR11 485 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 DUSP16Q9BY84 665 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 DMAP1Q9NPF5 467 aaPredicted RBP23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 PRDM6Q9NQX0 595 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 CDH23Q9H251 3354 aa23.43■■□□□ 1.34
CHMP2A-204ENST00000597848 MAP3K7CLP57077 242 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 SLC8A3P57103 927 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 ITIH3Q06033 890 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 LCLAT1Q6UWP7 414 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 ITIH5Q86UX2 942 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 ANKRD52Q8NB46 1076 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 ZNF397Q8NF99 534 aaPredicted RBP23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 UBA3Q8TBC4 463 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 BAP1Q92560 729 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 C8orf48Q96LL4 319 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 SMOQ99835 787 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 TTYH3Q9C0H2 523 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 S1PR5Q9H228 398 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 ADAM7Q9H2U9 754 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 MYO6Q9UM54 1294 aa23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.42■■□□□ 1.34
CHMP2A-204ENST00000597848 BEST1O76090 585 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 MICAL2O94851 1124 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 ATAT1Q5SQI0 421 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 CLEC20AQ6ZU45 233 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 TMC6Q7Z403 805 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 GPR149Q86SP6 731 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 FEZF2Q8TBJ5 459 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 TMEM30AQ9NV96 361 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 ASB3Q9Y575 518 aa23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 MTCL1Q9Y4B5 1905 aaKnown RBP23.41■■□□□ 1.34
CHMP2A-204ENST00000597848 A0A1W2PQJ5 194 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 GOLGA6L3A6NEY3 463 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 LRRC53A6NM62 1247 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 SLC38A8A6NNN8 435 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 M0QYV0 167 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 TPM1P09493 284 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CCDC172P0C7W6 258 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CYP11B1P15538 503 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 NPR3P17342 541 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 PTPN2P17706 415 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 KRT9P35527 623 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 PDE6CP51160 858 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 BCAT1P54687 386 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 SFMBT2Q5VUG0 894 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CYP26C1Q6V0L0 522 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 DNAJB7Q7Z6W7 309 aaPredicted RBP23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 TTC30AQ86WT1 665 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 FMNL3Q8IVF7 1028 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 STKLD1Q8NE28 680 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 MRFAP1L1Q96HT8 127 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 SPATA17Q96L03 361 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CORO1BQ9BR76 489 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 PDCL3Q9H2J4 239 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CSNK1G1Q9HCP0 422 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 CAPN11Q9UMQ6 739 aa23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 MAGED2Q9UNF1 606 aaPredicted RBP23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 LUC7L2Q9Y383 392 aaKnown RBP23.4■■□□□ 1.34
CHMP2A-204ENST00000597848 POU2F2P09086 479 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 CSH1P0DML2 217 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 CSH2P0DML3 217 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 FERP16591 822 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms