RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 GPR152Q8TDT2 470 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 PPP2R3CQ969Q6 453 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 C8orf48Q96LL4 319 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
LIG1-210ENST00000596332 SYT11Q9BT88 431 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
LIG1-210ENST00000596332 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 DZANK1Q9NVP4 752 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 ABI2Q9NYB9 513 aaPredicted RBP11.23□□□□□ -0.61
LIG1-210ENST00000596332 CYTH4Q9UIA0 394 aa11.23□□□□□ -0.61
LIG1-210ENST00000596332 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 F8VP50 259 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 CCL16O15467 120 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 CHRNB2P17787 502 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 TWF1Q12792 350 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 TBX2Q13207 712 aaPredicted RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 SLC5A9Q2M3M2 681 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 FIGNQ5HY92 759 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 PRSS36Q5K4E3 855 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 VSTM1Q6UX27 236 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 CCDC149Q6ZUS6 474 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 GPRIN1Q7Z2K8 1008 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 DNAJB7Q7Z6W7 309 aaPredicted RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 SLC47A2Q86VL8 602 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 SPATA2LQ8IUW3 424 aaPredicted RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 GIPC2Q8TF65 315 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 SLC35F5Q8WV83 523 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 DOCK6Q96HP0 2047 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 SPATA17Q96L03 361 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 SFXN1Q9H9B4 322 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 NOCTQ9UK39 431 aaKnown RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIG1-210ENST00000596332 COG5Q9UP83 839 aa11.22□□□□□ -0.61
LIG1-210ENST00000596332 USP15Q9Y4E8 981 aaPredicted RBP11.22□□□□□ -0.61
LIG1-210ENST00000596332 FAM92AA1XBS5 289 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 TADA3O75528 432 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 F11P03951 625 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 GYPCP04921 128 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 BMP1P13497 986 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 ADORA2BP29275 332 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 GPD2P43304 727 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 KCNQ1P51787 676 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
LIG1-210ENST00000596332 RAB41Q5JT25 222 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 DENND1BQ6P3S1 775 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 C4orf50Q6ZRC1 276 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 GAREM2Q75VX8 874 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 BHLHA9Q7RTU4 235 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 GRASPQ7Z6J2 395 aaPredicted RBP11.21□□□□□ -0.61
LIG1-210ENST00000596332 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
LIG1-210ENST00000596332 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 VSTM4Q8IW00 320 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 ANKRD52Q8NB46 1076 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 SCAMP5Q8TAC9 235 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 PSMG2Q969U7 264 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 TCEAL4Q96EI5 215 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 FAM81BQ96LP2 452 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 MYRFLQ96LU7 910 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 TTLL2Q9BWV7 592 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 AVENQ9NQS1 362 aaPredicted RBP11.21□□□□□ -0.61
LIG1-210ENST00000596332 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 TSPAN16Q9UKR8 245 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.61
LIG1-210ENST00000596332 ITIH6Q6UXX5 1313 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 C2orf16Q68DN1 1984 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 SLC38A8A6NNN8 435 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 PRRG1O14668 218 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 AP1G2O75843 785 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 MICAL2O94851 1124 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 TPM2P07951 284 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 CYP11B1P15538 503 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 RFX1P22670 979 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 SOX5P35711 763 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 ZNF75DP51815 510 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
LIG1-210ENST00000596332 TPM4P67936 248 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 ITIH3Q06033 890 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 PDE4CQ08493 712 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 RAPGEF1Q13905 1077 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
LIG1-210ENST00000596332 MGAT5BQ3V5L5 792 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 SGO2Q562F6 1265 aa11.2□□□□□ -0.62
LIG1-210ENST00000596332 LIN9Q5TKA1 542 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms