RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 BDNFP23560 247 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 ANXA13P27216 316 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 MAGEA11P43364 429 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 AMPD2Q01433 879 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 SATB1Q01826 763 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 EHHADHQ08426 723 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 RUNX3Q13761 415 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
CIRBP-241ENST00000593048 TRIM68Q6AZZ1 485 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 VSTM1Q6UX27 236 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 OR6B3Q8NGW1 331 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 MYRFLQ96LU7 910 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 EPC1Q9H2F5 836 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 EXOC1Q9NV70 894 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
CIRBP-241ENST00000593048 FRYLO94915 3013 aa17.26■□□□□ 0.35
CIRBP-241ENST00000593048 COL4A2P08572 1712 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 CKMP06732 381 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 USP17L7P0C7H9 530 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 GAS6Q14393 721 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 ZNF268Q14587 947 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-241ENST00000593048 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 WDR72Q3MJ13 1102 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 Q6ZS52 159 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 LIMS2Q7Z4I7 341 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 FAM83CQ9BQN1 747 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 CRTAC1Q9NQ79 661 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
CIRBP-241ENST00000593048 TADA3O75528 432 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 FAM160A1Q05DH4 1040 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 GRSF1Q12849 480 aaKnown RBP eCLIP17.24■□□□□ 0.352e-8■■□□□ 12.5
CIRBP-241ENST00000593048 BIRC3Q13489 604 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 KCNB1Q14721 858 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 C12orf56Q8IXR9 622 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 SYNPOQ8N3V7 929 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 MYCBPAPQ8TBZ2 947 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-241ENST00000593048 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 PAGE5Q96GU1 130 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 CYP2S1Q96SQ9 504 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 MRPL45Q9BRJ2 306 aaKnown RBP17.24■□□□□ 0.35
CIRBP-241ENST00000593048 EHD2Q9NZN4 543 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 NXF1Q9UBU9 619 aaKnown RBP17.24■□□□□ 0.35
CIRBP-241ENST00000593048 GMEB2Q9UKD1 530 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 NUP210Q8TEM1 1887 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-241ENST00000593048 F5P12259 2224 aa17.24■□□□□ 0.35
CIRBP-241ENST00000593048 A0A1B0GVL5 298 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 TRIM66O15016 1216 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 TACC1O75410 805 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 FAM163BP0C2L3 166 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 TDGF1P13385 188 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 ATICP31939 592 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 PSMD2Q13200 908 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 CCINQ13939 588 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 MTF1Q14872 753 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 PDGFRLQ15198 375 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 LPAL2Q16609 132 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 PRR23BQ6ZRT6 265 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 DENND5BQ6ZUT9 1274 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 GPR161Q8N6U8 529 aaKnown RBP17.23■□□□□ 0.35
CIRBP-241ENST00000593048 ARL14EPQ8N8R7 260 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-241ENST00000593048 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 RMDN1Q96DB5 314 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 SPATA17Q96L03 361 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 CEP295NLQ96MC4 621 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 DUS2Q9NX74 493 aaKnown RBP17.23■□□□□ 0.35
CIRBP-241ENST00000593048 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
CIRBP-241ENST00000593048 A8MXQ7 604 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 CHURC1-FNTBB4DL54 471 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 ACTN4O43707 911 aaKnown RBP17.22■□□□□ 0.35
CIRBP-241ENST00000593048 ARSAP15289 507 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 PFKFB1P16118 471 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 PTPN1P18031 435 aaKnown RBP17.22■□□□□ 0.35
CIRBP-241ENST00000593048 HDCP19113 662 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 CMA1P23946 247 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 IFNAR2P48551 515 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 FNTBP49356 437 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 CASP4P49662 377 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 PDE6CP51160 858 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 AP3M2P53677 418 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 MYL6P60660 151 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 KRT85P78386 507 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 STK4Q13043 487 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 HEATR6Q6AI08 1181 aaKnown RBP17.22■□□□□ 0.35
CIRBP-241ENST00000593048 CPA6Q8N4T0 437 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 SLC22A12Q96S37 553 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 TRPM5Q9NZQ8 1165 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 USP25Q9UHP3 1055 aa17.22■□□□□ 0.35
CIRBP-241ENST00000593048 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms