RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NELL2Q99435 816 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 SORBS1Q9BX66 1292 aaKnown RBP7.37□□□□□ -1.23
VMP1-215ENST00000592619 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 DNMT3BQ9UBC3 853 aaKnown RBP7.37□□□□□ -1.23
VMP1-215ENST00000592619 NEU2Q9Y3R4 380 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 RAD54BQ9Y620 910 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 UACAQ9BZF9 1416 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 CCDC195A0A1B0GUA6 201 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 DIRC3C9JPN6 131 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 E7ENX8 843 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 H7C4K7 107 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 PIP5K1BO14986 540 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 LRPAP1P30533 357 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 POLE2P56282 527 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 TAP2Q03519 686 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 JMJD6Q6NYC1 403 aaPredicted RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 CRTC1Q6UUV9 634 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 POLNQ7Z5Q5 900 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 GSPT2Q8IYD1 628 aaKnown RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 FUKQ8N0W3 1084 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 MB21D1Q8N884 522 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 TEX19Q8NA77 164 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 PSD4Q8NDX1 1056 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 STT3BQ8TCJ2 826 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 STYXQ8WUJ0 223 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 NEU1Q99519 415 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 KATNAL1Q9BW62 490 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 TTYH3Q9C0H2 523 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 PCDHAC1Q9H158 963 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 ZBTB26Q9HCK0 441 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 ITM2CQ9NQX7 267 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 VSX1Q9NZR4 365 aaPredicted RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 PPP4R1LQ9P1A2 415 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.36□□□□□ -1.23
VMP1-215ENST00000592619 GJD2Q9UKL4 321 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 PNMA2Q9UL42 364 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 ZMYND8Q9ULU4 1186 aaPredicted RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 ZFR2Q9UPR6 939 aaKnown RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 TBC1D30Q9Y2I9 924 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 LRRFIP2Q9Y608 721 aaKnown RBP7.36□□□□□ -1.23
VMP1-215ENST00000592619 ABCA8O94911 1581 aa7.36□□□□□ -1.23
VMP1-215ENST00000592619 TRIM38O00635 465 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 RRP9O43818 475 aaKnown RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 GLP2RO95838 553 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 CALRP27797 417 aaKnown RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 GCLCP48506 637 aaPredicted RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 PTDSS1P48651 473 aaKnown RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 LOXL3P58215 753 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 NHLH2Q02577 135 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 HHEXQ03014 270 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 TRIM71Q2Q1W2 868 aaKnown RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 ZNF750Q32MQ0 723 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.35□□□□□ -1.23
VMP1-215ENST00000592619 TSHZ3Q63HK5 1081 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 MRNIPQ6NTE8 343 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 TAF2Q6P1X5 1199 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 TMPRSS9Q7Z410 1059 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 CCDC28AQ8IWP9 274 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 SENP7Q9BQF6 1050 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 RNPEPQ9H4A4 650 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 AS3MTQ9HBK9 375 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 CTTNBP2NLQ9P2B4 639 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 CDY1Q9Y6F8 540 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 DUSP10Q9Y6W6 482 aa7.35□□□□□ -1.23
VMP1-215ENST00000592619 NPEPPSL1A6NEC2 478 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 CCER2I3L3R5 266 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 LEFTY2O00292 366 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 IPO5O00410 1097 aaKnown RBP7.34□□□□□ -1.23
VMP1-215ENST00000592619 IRAK2O43187 625 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 FOXS1O43638 330 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 NPPBP16860 134 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 SLC5A2P31639 672 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 MAPK9P45984 424 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 PXNP49023 591 aaPredicted RBP7.34□□□□□ -1.23
VMP1-215ENST00000592619 DGKEP52429 567 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 TMTC4Q5T4D3 741 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 RAP1GAP2Q684P5 730 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 MZT2AQ6P582 158 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 LAYNQ6UX15 382 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 ZNF280BQ86YH2 543 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 GATAD2AQ86YP4 633 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 OR56A1Q8NGH5 318 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 OTUD7AQ8TE49 926 aaPredicted RBP7.34□□□□□ -1.23
VMP1-215ENST00000592619 FAM227BQ96M60 508 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 MNTQ99583 582 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 SLC46A2Q9BY10 475 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 HSFX1Q9UBD0 423 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 DTNAQ9Y4J8 743 aa7.34□□□□□ -1.23
VMP1-215ENST00000592619 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.34□□□□□ -1.23
VMP1-215ENST00000592619 RAPGEF6Q8TEU7 1601 aa7.34□□□□□ -1.24
VMP1-215ENST00000592619 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 PLB1Q6P1J6 1458 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms