RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 PTK2Q05397 1052 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 KCNC3Q14003 757 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF512Q96ME7 567 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 STK33Q9BYT3 514 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 ABCB6Q9NP58 842 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 DMAP1Q9NPF5 467 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 CLEC1BQ9P126 229 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 TSPAN16Q9UKR8 245 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 COG5Q9UP83 839 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 F8VP50 259 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 C1RP00736 705 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 SOX5P35711 763 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 LTBRP36941 435 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 CFAP221Q4G0U5 840 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 SYCE2Q6PIF2 218 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 VSTM1Q6UX27 236 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 TMEM184AQ6ZMB5 413 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 ITIH5Q86UX2 942 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 HNRNPABQ99729 332 aaKnown RBP13.63□□□□□ -0.23
DDX39A-213ENST00000590315 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
DDX39A-213ENST00000590315 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 ACP6Q9NPH0 428 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 SEPT11Q9NVA2 429 aaKnown RBP13.63□□□□□ -0.23
DDX39A-213ENST00000590315 CDH22Q9UJ99 828 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■□□□□ 10.4
DDX39A-213ENST00000590315 REV3LO60673 3130 aa13.63□□□□□ -0.23
DDX39A-213ENST00000590315 NUP210Q8TEM1 1887 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-213ENST00000590315 MYL4P12829 197 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ATF6P18850 670 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 HOXA9P31269 272 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 MAGEA11P43364 429 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF132P52740 706 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 CACNA2D1P54289 1103 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 BCAT1P54687 386 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 BPIFB4P59827 614 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 TFF2Q03403 129 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ITIH3Q06033 890 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 STILQ15468 1287 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ASIC2Q16515 512 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ARHGAP17Q68EM7 881 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 SARM1Q6SZW1 724 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 GRASPQ7Z6J2 395 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-213ENST00000590315 SLC47A2Q86VL8 602 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-213ENST00000590315 UBA3Q8TBC4 463 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 TFAP2BQ92481 460 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 GPR88Q9GZN0 384 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 ASAH2Q9NR71 780 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 HCFC1R1Q9NWW0 138 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
DDX39A-213ENST00000590315 FAM170AA1A519 330 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 GOLGA6L3A6NEY3 463 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 LRRC53A6NM62 1247 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 SLC38A8A6NNN8 435 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 O00370 1275 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 AP5Z1O43299 807 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 MICAL2O94851 1124 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CCDC172P0C7W6 258 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CSH1P0DML2 217 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CSH2P0DML3 217 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 NPR3P17342 541 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 PTPN2P17706 415 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 KRT9P35527 623 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 MTHFRP42898 656 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF75DP51815 510 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 JAM2P57087 298 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 NTHL1P78549 312 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 SMAD4Q13485 552 aaKnown RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 MTMR3Q13615 1198 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CLEC20AQ6ZU45 233 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 PAQR9Q6ZVX9 377 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 PDZD4Q76G19 769 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 RTL10Q7L3V2 364 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 GET4Q7L5D6 327 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 GPR149Q86SP6 731 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CMASQ8NFW8 434 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 MSLNLQ96KJ4 702 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 KCNK16Q96T55 309 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 DUSP16Q9BY84 665 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 ADAM7Q9H2U9 754 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms