RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 BMP8AQ7Z5Y6 402 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 DAAM2Q86T65 1068 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 ZC3H18Q86VM9 953 aaKnown RBP6.35□□□□□ -1.39
SMAD4-208ENST00000589706 GLB1L2Q8IW92 636 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 FAM26EQ8N5C1 309 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 FAM71BQ8TC56 605 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 HDAC7Q8WUI4 952 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 ZFAND2BQ8WV99 257 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 EVI5LQ96CN4 794 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 THOC1Q96FV9 657 aaKnown RBP6.35□□□□□ -1.39
SMAD4-208ENST00000589706 PAWRQ96IZ0 340 aaKnown RBP6.35□□□□□ -1.39
SMAD4-208ENST00000589706 TBCBQ99426 244 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 TRIM7Q9C029 511 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 ATP6V0A4Q9HBG4 840 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMAD4-208ENST00000589706 POLHQ9Y253 713 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 EXOC6BQ9Y2D4 811 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 EYSQ5T1H1 3165 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 TTC28Q96AY4 2481 aa6.35□□□□□ -1.39
SMAD4-208ENST00000589706 ZSWIM8A7E2V4 1837 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 DDX60Q8IY21 1712 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 EBAG9O00559 213 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 WNT10BO00744 389 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 MAP2K7O14733 419 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 LIN7AO14910 233 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 TCEA3O75764 348 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SGPL1O95470 568 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 FURINP09958 794 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 EZRP15311 586 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ZKSCAN1P17029 563 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SYN1P17600 705 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PEX2P28328 305 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SLC8A1P32418 973 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 MAGEA10P43363 369 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 AFMP43652 599 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CDR1P51861 262 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CLNS1AP54105 237 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 NAP1L1P55209 391 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 NRG3P56975 720 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 DSC2Q02487 901 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PPP3CAQ08209 521 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CNN3Q15417 329 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 STILQ15468 1287 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 TAF7Q15545 349 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 DGKDQ16760 1214 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ERCC6LQ2NKX8 1250 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ZNF792Q3KQV3 632 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PARP10Q53GL7 1025 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 KANK2Q63ZY3 851 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ERAP2Q6P179 960 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 XRRA1Q6P2D8 792 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CPLX2Q6PUV4 134 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SPATA21Q7Z572 469 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PLA2G4DQ86XP0 818 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 DTX3Q8N9I9 347 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 KLHDC4Q8TBB5 520 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 TBC1D16Q8TBP0 767 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 KAT5Q92993 513 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ZKSCAN4Q969J2 545 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CCDC138Q96M89 665 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 CDX2Q99626 313 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 JPH2Q9BR39 696 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 NUP62CLQ9H1M0 184 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 RMI1Q9H9A7 625 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 TRPV5Q9NQA5 729 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 DLL4Q9NR61 685 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 RBM12Q9NTZ6 932 aaKnown RBP6.34□□□□□ -1.39
SMAD4-208ENST00000589706 RGL1Q9NZL6 768 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ARHGAP20Q9P2F6 1191 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
SMAD4-208ENST00000589706 PRUNE2Q8WUY3 3088 aa6.34□□□□□ -1.4
SMAD4-208ENST00000589706 LAMB2P55268 1798 aa6.34□□□□□ -1.4
SMAD4-208ENST00000589706 ANKRD36CQ5JPF3 1778 aa6.34□□□□□ -1.4
SMAD4-208ENST00000589706 RPAP1Q9BWH6 1393 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 ALPK3Q96L96 1907 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 ABHD14A-ACY1A0A1B0GW23 586 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 CFAP69A5D8W1 941 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 GOLGA6L9A6NEM1 432 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 ABLIM1O14639 778 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 MGEA5O60502 916 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 MAFO75444 373 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 WNT11O96014 354 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 TFRCP02786 760 aaKnown RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 FTLP02792 175 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 RPLP2P05387 115 aaKnown RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 ARHGAP25P42331 645 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 ZNF75DP51815 510 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 MAP2K6P52564 334 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 GSDMDP57764 484 aa6.33□□□□□ -1.4
SMAD4-208ENST00000589706 PSMC1P62191 440 aaKnown RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 YBX1P67809 324 aaKnown RBP6.33□□□□□ -1.4
SMAD4-208ENST00000589706 UBXN2AP68543 259 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms