RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MAGEA11P43364 429 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 MYL7Q01449 175 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 STPG1Q5TH74 334 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 IL31Q6EBC2 164 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 TCEAL6Q6IPX3 200 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 CC2D1AQ6P1N0 951 aaPredicted RBP19.76■□□□□ 0.75
CCDC43-204ENST00000588687 C12orf50Q8NA57 414 aaPredicted RBP19.76■□□□□ 0.75
CCDC43-204ENST00000588687 TCEAL3Q969E4 200 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 DUS2Q9NX74 493 aaKnown RBP19.76■□□□□ 0.75
CCDC43-204ENST00000588687 EBF1Q9UH73 591 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 SNX9Q9Y5X1 595 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 TRAV19A0A0A6YYK7 116 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 CKMP06732 381 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 USP17L7P0C7H9 530 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 SHC2P98077 582 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 AMPD2Q01433 879 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 RESTQ13127 1097 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 CUL4AQ13619 759 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 N4BP2L1Q5TBK1 243 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-204ENST00000588687 CSGALNACT2Q8N6G5 542 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-204ENST00000588687 CD101Q93033 1021 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 ATP2A3Q93084 1043 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 ARHGAP26Q9UNA1 814 aa19.75■□□□□ 0.75
CCDC43-204ENST00000588687 MORC2Q9Y6X9 1032 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-204ENST00000588687 ANTXRLA6NF34 631 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 DCLK1O15075 740 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 ATP2C2O75185 946 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 APBB3O95704 486 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 LDHAP00338 332 aaKnown RBP19.74■□□□□ 0.75
CCDC43-204ENST00000588687 PCSK1P29120 753 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 LHX1P48742 406 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 ALCAMQ13740 583 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 DMC1Q14565 340 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 RRAGBQ5VZM2 374 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 LMBRD2Q68DH5 695 aaPredicted RBP19.74■□□□□ 0.75
CCDC43-204ENST00000588687 FAM173BQ6P4H8 233 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 SV2BQ7L1I2 683 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 GLIS3Q8NEA6 775 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 OR5B17Q8NGF7 314 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 SH3RF2Q8TEC5 729 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 CACTINQ8WUQ7 758 aaKnown RBP19.74■□□□□ 0.75
CCDC43-204ENST00000588687 CRTAC1Q9NQ79 661 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 VPS45Q9NRW7 570 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 CCDC39Q9UFE4 941 aa19.74■□□□□ 0.75
CCDC43-204ENST00000588687 ABCA7Q8IZY2 2146 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 AKAP13Q12802 2813 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 IGF2RP11717 2491 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
CCDC43-204ENST00000588687 LMO2P25791 158 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 OPRD1P41143 372 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 IFNAR2P48551 515 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 USP46P62068 366 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 PSMC1P62191 440 aaKnown RBP19.73■□□□□ 0.75
CCDC43-204ENST00000588687 RBP5P82980 135 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 SPATA2LQ8IUW3 424 aaPredicted RBP19.73■□□□□ 0.75
CCDC43-204ENST00000588687 MYLPFQ96A32 169 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 ACDQ96AP0 544 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 SPATA17Q96L03 361 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 SYT15Q9BQS2 421 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 LSM14BQ9BX40 385 aaKnown RBP19.73■□□□□ 0.75
CCDC43-204ENST00000588687 LINC00597Q9H2U6 94 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 PCIF1Q9H4Z3 704 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 INTS13Q9NVM9 706 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 ANGPTL2Q9UKU9 493 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 NME7Q9Y5B8 376 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 PCDHB13Q9Y5F0 798 aa19.73■□□□□ 0.75
CCDC43-204ENST00000588687 TNRC6BQ9UPQ9 1833 aaKnown RBP19.73■□□□□ 0.75
CCDC43-204ENST00000588687 OLFM2O95897 454 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 KRT19P08727 400 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 TMEM191BP0C7N4 346 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 HOXD13P35453 343 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 DPH6Q7L8W6 267 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 RASSF3Q86WH2 238 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 SCN4BQ8IWT1 228 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 GPD1LQ8N335 351 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 TTLL2Q9BWV7 592 aa19.72■□□□□ 0.75
CCDC43-204ENST00000588687 PLXND1Q9Y4D7 1925 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 BCLAF3A2AJT9 711 aaKnown RBP19.71■□□□□ 0.75
CCDC43-204ENST00000588687 K7EQS6 105 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 PRPF6O94906 941 aaKnown RBP19.71■□□□□ 0.75
CCDC43-204ENST00000588687 IDEP14735 1019 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 KCNA4P22459 653 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 KCNB1Q14721 858 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 PMS2CLQ68D20 193 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 VSTM1Q6UX27 236 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 CBWD2Q8IUF1 395 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 USP33Q8TEY7 942 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 CEP295NLQ96MC4 621 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 TMEM30AQ9NV96 361 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 CDH9Q9ULB4 789 aa19.71■□□□□ 0.75
CCDC43-204ENST00000588687 LNP1A1A4G5 178 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 KCNK5O95279 499 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 WARSP23381 471 aaKnown RBP19.7■□□□□ 0.74
CCDC43-204ENST00000588687 TXLNAP40222 546 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 MESP2Q0VG99 397 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 ELF2Q15723 593 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 C4orf50Q6ZRC1 276 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 CCDC73Q6ZRK6 1079 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms