RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 OPRD1P41143 372 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 MAPK8P45983 427 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 ZNF131P52739 623 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 GTF2BQ00403 316 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 LMAN2Q12907 356 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 CRY1Q16526 586 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 ARMCX6Q7L4S7 300 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 PDCL2Q8N4E4 241 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
IFT20-216ENST00000588477 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 FIZ1Q96SL8 496 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 TMEM74BQ9NUR3 256 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 DDX43Q9NXZ2 648 aaKnown RBP16.42■□□□□ 0.22
IFT20-216ENST00000588477 GCNT4Q9P109 453 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 EVLQ9UI08 416 aaPredicted RBP16.42■□□□□ 0.22
IFT20-216ENST00000588477 GTF3C4Q9UKN8 822 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 NEUROG3Q9Y4Z2 214 aa16.42■□□□□ 0.22
IFT20-216ENST00000588477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 MAP3K13O43283 966 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 NFATC1O95644 943 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 KRT18P05783 430 aaKnown RBP16.41■□□□□ 0.22
IFT20-216ENST00000588477 HNRNPLP14866 589 aaKnown RBP eCLIP16.41■□□□□ 0.22
IFT20-216ENST00000588477 HDCP19113 662 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 KCNB1Q14721 858 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
IFT20-216ENST00000588477 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 CRELD2Q6UXH1 353 aaPredicted RBP16.41■□□□□ 0.22
IFT20-216ENST00000588477 SCN4BQ8IWT1 228 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 TMEFF1Q8IYR6 380 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 FRMD1Q8N878 549 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 OLIG1Q8TAK6 271 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
IFT20-216ENST00000588477 ABCB6Q9NP58 842 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
IFT20-216ENST00000588477 PKD1L2Q7Z442 2459 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 SPAARA0A1B0GVQ0 90 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 HUS1O60921 280 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 ALDH1A2O94788 518 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 ENGP17813 658 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 P2RY2P41231 377 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 PNPLA4P41247 253 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 MYL7Q01449 175 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 MCM6Q14566 821 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 CCDC142Q17RM4 750 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 LPCAT2Q7L5N7 544 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 SPATA2LQ8IUW3 424 aaPredicted RBP16.4■□□□□ 0.22
IFT20-216ENST00000588477 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 IKZF4Q9H2S9 585 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 AGAP1Q9UPQ3 857 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 MSRB2Q9Y3D2 182 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
IFT20-216ENST00000588477 TNFRSF10BO14763 440 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 IL18RAPO95256 599 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 ITGB3P05106 788 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 TCF3P15923 654 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
IFT20-216ENST00000588477 ABCD1P33897 745 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 TIE1P35590 1138 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 PTGER3P43115 390 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 SIM1P81133 766 aaPredicted RBP16.39■□□□□ 0.21
IFT20-216ENST00000588477 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
IFT20-216ENST00000588477 ZXDBP98169 803 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 GAB4Q2WGN9 574 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 NT5DC4Q86YG4 428 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 SYT12Q8IV01 421 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 SFTPA1Q8IWL2 248 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 ALLCQ8N6M5 410 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 TXNDC5Q8NBS9 432 aaKnown RBP16.39■□□□□ 0.21
IFT20-216ENST00000588477 POMGNT1Q8WZA1 660 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 SPACA7Q96KW9 195 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 PKMYT1Q99640 499 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 BLOC1S4Q9NUP1 217 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
IFT20-216ENST00000588477 PLXNB3Q9ULL4 1909 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 CACNA1EQ15878 2313 aa16.39■□□□□ 0.21
IFT20-216ENST00000588477 PCDH15Q96QU1 1955 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 MYMKA6NI61 221 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 HCRTO43612 131 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 TBCAO75347 108 aaKnown RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 KLF8O95600 359 aaPredicted RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 SLC6A11P48066 632 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 WNT7BP56706 349 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 POU5F1Q01860 360 aaKnown RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 CFAP221Q4G0U5 840 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 ARL6IP4Q66PJ3 421 aaKnown RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 SCARA3Q6AZY7 606 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 OSTM1Q86WC4 334 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 IL17RCQ8NAC3 791 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms