RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 PRG3Q9Y2Y8 225 aaPredicted RBP13.37□□□□□ -0.27
TMED1-204ENST00000588289 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
TMED1-204ENST00000588289 PTPRDP23468 1912 aa13.37□□□□□ -0.27
TMED1-204ENST00000588289 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
TMED1-204ENST00000588289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 PGRMC1O00264 195 aaKnown RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 PROSCO94903 275 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 ERBB2P04626 1255 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 KRT7P08729 469 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 PLA2G4AP47712 749 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 RWDD2BP57060 319 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 AMPD2Q01433 879 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 CREMQ03060 361 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 ITIH3Q06033 890 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 PTPN20Q4JDL3 420 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 SPATA2LQ8IUW3 424 aaPredicted RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 RHOT1Q8IXI2 618 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 UBA3Q8TBC4 463 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 C2orf15Q8WU43 125 aaKnown RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 TOP1MTQ969P6 601 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 FUBP3Q96I24 572 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMED1-204ENST00000588289 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 TLR10Q9BXR5 811 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 NRDE2Q9H7Z3 1164 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 PNPLA8Q9NP80 782 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 DDX56Q9NY93 547 aaKnown RBP13.36□□□□□ -0.27
TMED1-204ENST00000588289 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 SSX2IPQ9Y2D8 614 aa13.36□□□□□ -0.27
TMED1-204ENST00000588289 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 NRP1O14786 923 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 AP1G2O75843 785 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 DDHD2O94830 711 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 UPP2O95045 317 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 OAZ2O95190 189 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 CALCAP01258 141 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 FGBP02675 491 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 COMTP21964 271 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 PSMA2P25787 234 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 LMO2P25791 158 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 CTNNA2P26232 953 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
TMED1-204ENST00000588289 PDE4CQ08493 712 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 GPNMBQ14956 572 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
TMED1-204ENST00000588289 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 ARCQ7LC44 396 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 FAM35AQ86V20 835 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
TMED1-204ENST00000588289 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 YME1L1Q96TA2 773 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 ZSWIM1Q9BR11 485 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 CARD6Q9BX69 1037 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 SLC4A5Q9BY07 1137 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
TMED1-204ENST00000588289 KRT82Q9NSB4 513 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
TMED1-204ENST00000588289 RRN3Q9NYV6 651 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
TMED1-204ENST00000588289 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 UQCRHLA0A096LP55 91 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CCDC188H7C350 402 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 TRIM66O15016 1216 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 HSF2BPO75031 334 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 DGKIO75912 1065 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 UQCRHP07919 91 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 GLI1P08151 1106 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CCDC130P13994 396 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CSF2RAP15509 400 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
TMED1-204ENST00000588289 SDC4P31431 198 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 SSTR3P32745 418 aaPredicted RBP13.34□□□□□ -0.27
TMED1-204ENST00000588289 CTNNA1P35221 906 aaKnown RBP13.34□□□□□ -0.27
TMED1-204ENST00000588289 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMED1-204ENST00000588289 BRCC3P46736 316 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 BCAR1P56945 870 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 PTP4A2Q12974 167 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
TMED1-204ENST00000588289 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
TMED1-204ENST00000588289 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 LRRC38Q5VT99 294 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms