RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 GJC1P36383 396 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 NOMO2Q5JPE7 1267 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 CLLU1OSQ5K130 101 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 LRRC38Q5VT99 294 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 FUKQ8N0W3 1084 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 URGCPQ8TCY9 931 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 TMEM161AQ9NX61 479 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 MTUS1Q9ULD2 1270 aa20.9■□□□□ 0.94
TRIM47-204ENST00000587339 I3L4J1 428 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 HEXIM1O94992 359 aaKnown RBP20.89■□□□□ 0.93
TRIM47-204ENST00000587339 ZRANB2O95218 330 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRIM47-204ENST00000587339 TKTP29401 623 aaKnown RBP20.89■□□□□ 0.93
TRIM47-204ENST00000587339 SLC8A3P57103 927 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 ANKRD33Q7Z3H0 272 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 ZDHHC17Q8IUH5 632 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 CCDC50Q8IVM0 306 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 SCUBE3Q8IX30 993 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 CCDC26Q8TAB7 109 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 HASPINQ8TF76 798 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 SEPT8Q92599 483 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 CRISPLD2Q9H0B8 497 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 PLEKHA4Q9H4M7 779 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 KANSL3Q9P2N6 904 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 AMACRQ9UHK6 382 aa20.89■□□□□ 0.93
TRIM47-204ENST00000587339 GLI1P08151 1106 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 COL6A1P12109 1028 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 TCF4P15884 667 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 BRCC3P46736 316 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 MDH1BQ5I0G3 518 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 ZFYVE27Q5T4F4 411 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 KIAA0319Q5VV43 1072 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 DCLRE1AQ6PJP8 1040 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 MAATS1Q7Z4T9 603 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 EXD1Q8NHP7 514 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 PIWIL1Q96J94 861 aaKnown RBP20.88■□□□□ 0.93
TRIM47-204ENST00000587339 SYT15Q9BQS2 421 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 HIPK3Q9H422 1215 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 CYLDQ9NQC7 956 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 DCDC2CA8MYV0 355 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 ENPP3O14638 875 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 PCSK1P29120 753 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 SLC6A3Q01959 620 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 ACAP1Q15027 740 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 LLGL1Q15334 1064 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 CCDC142Q17RM4 750 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 MAP9Q49MG5 647 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 OLFML1Q6UWY5 402 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 CCNI2Q6ZMN8 369 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-204ENST00000587339 METTL23Q86XA0 190 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 IFT20Q8IY31 132 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 APBB2Q92870 758 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 DUSP16Q9BY84 665 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 ELAC1Q9H777 363 aaKnown RBP20.88■□□□□ 0.93
TRIM47-204ENST00000587339 CDH9Q9ULB4 789 aa20.88■□□□□ 0.93
TRIM47-204ENST00000587339 TCRBV7S2A1N4TA0A589 114 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 FSCN2O14926 492 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 PAPSS1O43252 624 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 LRCH4O75427 683 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 CAPN15O75808 1086 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 RNF8O76064 485 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 ACADSBP45954 432 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 PLA2G4AP47712 749 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 MNX1P50219 401 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 ZNF143P52747 638 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 GUCY2DQ02846 1103 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 RNASELQ05823 741 aaKnown RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 SMC1AQ14683 1233 aaKnown RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 BEND6Q5SZJ8 279 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 CD300LGQ6UXG3 332 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 FAM43BQ6ZT52 329 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-204ENST00000587339 ZNF280BQ86YH2 543 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 PRELID2Q8N945 189 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 SPATA18Q8TC71 538 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 RSPH1Q8WYR4 309 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 HSFY1Q96LI6 401 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 B3GNT5Q9BYG0 378 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 EPB41L5Q9HCM4 733 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 CRTAC1Q9NQ79 661 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 DSEQ9UL01 958 aa20.87■□□□□ 0.93
TRIM47-204ENST00000587339 M0QZQ0 153 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 CLDN5O00501 218 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 XPO1O14980 1071 aaKnown RBP20.86■□□□□ 0.93
TRIM47-204ENST00000587339 GRAP2O75791 330 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 GABBR2O75899 941 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 DDHD2O94830 711 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 CYP11A1P05108 521 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 NPR3P17342 541 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 GPD1P21695 349 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 CETN2P41208 172 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 RPL34P49207 117 aaKnown RBP20.86■□□□□ 0.93
TRIM47-204ENST00000587339 PLCB3Q01970 1234 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 DSC1Q08554 894 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ATP13A4Q4VNC1 1196 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ODF2Q5BJF6 829 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 POLNQ7Z5Q5 900 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ZDHHC14Q8IZN3 488 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 ABI1Q8IZP0 508 aa20.86■□□□□ 0.93
TRIM47-204ENST00000587339 SCLYQ96I15 445 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms