RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 LIMS2Q7Z4I7 341 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 FAM84AQ96KN4 292 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 SPATA17Q96L03 361 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 CYP2S1Q96SQ9 504 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 FGFBP2Q9BYJ0 223 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 INTS13Q9NVM9 706 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 CDH9Q9ULB4 789 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 WNT6Q9Y6F9 365 aa16.32■□□□□ 0.2
MBD1-215ENST00000586884 HCRTO43612 131 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 PRPF6O94906 941 aaKnown RBP16.31■□□□□ 0.2
MBD1-215ENST00000586884 APBB3O95704 486 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 TNNC2P02585 160 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 PFKLP17858 780 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 SYT1P21579 422 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 NR1H3Q13133 447 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
MBD1-215ENST00000586884 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 RPLP0P6Q8NHW5 317 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 SH3RF2Q8TEC5 729 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 PANK2Q9BZ23 570 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
MBD1-215ENST00000586884 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 ARHGAP26Q9UNA1 814 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 OBSL1O75147 1896 aa16.31■□□□□ 0.2
MBD1-215ENST00000586884 ACACBO00763 2458 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 DENND4CQ5VZ89 1909 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 A0A087X0B3 334 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 ZNF233A6NK53 670 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 NFATC1O95644 943 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 HDCP19113 662 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 MPLP40238 635 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 ELF2Q15723 593 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 CCDC6Q16204 474 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 DUOXA2Q1HG44 320 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 PLK5Q496M5 336 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
MBD1-215ENST00000586884 WDR49Q8IV35 697 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 OR5B17Q8NGF7 314 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 EZH1Q92800 747 aaPredicted RBP16.3■□□□□ 0.2
MBD1-215ENST00000586884 MYLPFQ96A32 169 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 KIAA1586Q9HCI6 787 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 VPS45Q9NRW7 570 aa16.3■□□□□ 0.2
MBD1-215ENST00000586884 KMT2BQ9UMN6 2715 aaPredicted RBP16.3■□□□□ 0.2
MBD1-215ENST00000586884 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 TM4SF5O14894 197 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 ATP2C2O75185 946 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
MBD1-215ENST00000586884 LMO2P25791 158 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 PSMC1P62191 440 aaKnown RBP16.29■□□□□ 0.2
MBD1-215ENST00000586884 DMC1Q14565 340 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 STPG1Q5TH74 334 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
MBD1-215ENST00000586884 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 KIAA1958Q8N8K9 716 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 DUSP15Q9H1R2 295 aaPredicted RBP16.29■□□□□ 0.2
MBD1-215ENST00000586884 CRTAC1Q9NQ79 661 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 POLR3BQ9NW08 1133 aaPredicted RBP16.29■□□□□ 0.2
MBD1-215ENST00000586884 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
MBD1-215ENST00000586884 TPRP12270 2363 aaKnown RBP16.28■□□□□ 0.2
MBD1-215ENST00000586884 TRIM66O15016 1216 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 KCNA4P22459 653 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 BDNFP23560 247 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 ANXA13P27216 316 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 GRIK1P39086 918 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 PPP3CCP48454 512 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 PSMD2Q13200 908 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 C11orf74Q86VG3 221 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 PDILTQ8N807 584 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 MYCBPAPQ8TBZ2 947 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 TTLL2Q9BWV7 592 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 CUEDC2Q9H467 287 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
MBD1-215ENST00000586884 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
MBD1-215ENST00000586884 GREB1Q4ZG55 1949 aa16.27■□□□□ 0.2
MBD1-215ENST00000586884 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
MBD1-215ENST00000586884 KRT37O76014 449 aa16.27■□□□□ 0.2
MBD1-215ENST00000586884 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
MBD1-215ENST00000586884 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
MBD1-215ENST00000586884 NOP14P78316 857 aaKnown RBP16.27■□□□□ 0.2
MBD1-215ENST00000586884 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
MBD1-215ENST00000586884 ST3GAL2Q16842 350 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms