RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MBTPS1Q14703 1052 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PAN2Q504Q3 1202 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 MDH1BQ5I0G3 518 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 TEX35Q5T0J7 233 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 MEI1Q5TIA1 1274 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PAPD7Q5XG87 772 aaKnown RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 OR6B2Q6IFH4 312 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PSRC1Q6PGN9 363 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 TRAF7Q6Q0C0 670 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PALB2Q86YC2 1186 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 SPATA2LQ8IUW3 424 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 CCDC50Q8IVM0 306 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 FEZF2Q8TBJ5 459 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 HASPINQ8TF76 798 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ATRIPQ8WXE1 791 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ARHGEF26Q96DR7 871 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 SMARCD1Q96GM5 515 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 CAPZA3Q96KX2 299 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 SUSD3Q96L08 255 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 MCEEQ96PE7 176 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 OSBPL9Q96SU4 736 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PCDHB18PQ96TA0 734 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ACBD6Q9BR61 282 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ZBED2Q9BTP6 218 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ADAM33Q9BZ11 813 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 LRRC4Q9HBW1 653 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 AAASQ9NRG9 546 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 KRT82Q9NSB4 513 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 RNF19AQ9NV58 838 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 TAS2R14Q9NYV8 317 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 HMGXB4Q9UGU5 601 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 ADAM28Q9UKQ2 775 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 MTUS1Q9ULD2 1270 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 STAP1Q9ULZ2 295 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 FAN1Q9Y2M0 1017 aa6.53□□□□□ -1.36
LIG3-206ENST00000586058 PRG3Q9Y2Y8 225 aaPredicted RBP6.53□□□□□ -1.36
LIG3-206ENST00000586058 FAM170AA1A519 330 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 M0QZQ0 153 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 XPO1O14980 1071 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 KIAA0355O15063 1070 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 SPTLC1O15269 473 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 FBXO21O94952 628 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CALCAP01258 141 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CYP11A1P05108 521 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 KRT7P08729 469 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 KRT3P12035 628 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CCDC130P13994 396 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CPB1P15086 417 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 NPR3P17342 541 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PTPN1P18031 435 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 LAG3P18627 525 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PSMA2P25787 234 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 RDXP35241 583 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 PPM1AP35813 382 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 GJC1P36383 396 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 BRCC3P46736 316 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 AARSP49588 968 aaKnown RBP eCLIP6.52□□□□□ -1.37
LIG3-206ENST00000586058 RWDD2BP57060 319 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 FAM189BP81408 668 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PLCB3Q01970 1234 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CREMQ03060 361 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 FPGSQ05932 587 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 DSC1Q08554 894 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 SMARCB1Q12824 385 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 ACAP1Q15027 740 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PPP2R5EQ16537 467 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 NFE2Q16621 373 aaPredicted RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 LRRC26Q2I0M4 334 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 EFHC1Q5JVL4 640 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CLLU1OSQ5K130 101 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 CYP4A22Q5TCH4 519 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 WSCD1Q658N2 575 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PLEKHA7Q6IQ23 1121 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 MFSD5Q6N075 450 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 KIAA1841Q6NSI8 718 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 DENND1BQ6P3S1 775 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 FAM35AQ86V20 835 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CEP57Q86XR8 500 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 COLGALT2Q8IYK4 626 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 CRYBG2Q8N1P7 616 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 ANKRD52Q8NB46 1076 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 GSTCDQ8NEC7 633 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 UBA3Q8TBC4 463 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 SLC2A14Q8TDB8 520 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 STK32AQ8WU08 396 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 KBTBD7Q8WVZ9 684 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 LINC01599Q8WXQ3 324 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 TFAP2BQ92481 460 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 TMEM169Q96HH4 297 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 RBM41Q96IZ5 413 aaKnown RBP6.52□□□□□ -1.37
LIG3-206ENST00000586058 HSFY1Q96LI6 401 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 RUNDC3BQ96NL0 473 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 TWNKQ96RR1 684 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 PSMB7Q99436 277 aa6.52□□□□□ -1.37
LIG3-206ENST00000586058 LBHD1Q9BQE6 289 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms