RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 WHRNQ9P202 907 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 A0A0U1RQF3 1178 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 DCDC2CA8MYV0 355 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZNF623O75123 536 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ACO1P21399 889 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ATICP31939 592 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 BPIFB4P59827 614 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 FMO1Q01740 532 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CAV1Q03135 178 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TLE2Q04725 743 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ACTN3Q08043 901 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ZNF211Q13398 564 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MESDQ14696 234 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TNFAIP8L3Q5GJ75 292 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SCARA5Q6ZMJ2 495 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 AGMOQ6ZNB7 445 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CCDC121Q6ZUS5 278 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CACNA2D3Q8IZS8 1091 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RNF169Q8NCN4 708 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 FBXO25Q8TCJ0 367 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 HPDLQ96IR7 371 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PCDHB18PQ96TA0 734 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GAD1Q99259 594 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PCDHB4Q9Y5E5 795 aa15.82■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GOLGA6L7A0A1B0GV03 622 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PTGESO14684 152 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 FSCN2O14926 492 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 XPOTO43592 962 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 NBNO60934 754 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 WEE2P0C1S8 567 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MLH1P40692 756 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ASPAP45381 313 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 FAAP100Q0VG06 881 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GPNMBQ14956 572 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SWT1Q5T5J6 900 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TMEM270Q6UE05 265 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TAOK1Q7L7X3 1001 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ANKLE1Q8NAG6 615 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CABS1Q96KC9 395 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TSPAN18Q96SJ8 248 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SNX24Q9Y343 169 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SCN5AQ14524 2016 aa15.81■□□□□ 0.12
CDK5RAP3-236ENST00000584991 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 H0YHG0 523 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PPEF2O14830 753 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RGS16O15492 202 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SPOPO43791 374 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CALCAP01258 141 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ATF7P17544 494 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CD58P19256 250 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ITIH2P19823 946 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RPL21P46778 160 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SOX4Q06945 474 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CALCOCO2Q13137 446 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 LACTB2Q53H82 288 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 UBR7Q8N806 425 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 KRT35Q92764 455 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 C18orf8Q96DM3 657 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CHMP6Q96FZ7 201 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TOX2Q96NM4 488 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 XPO6Q96QU8 1125 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RABEP2Q9H5N1 569 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 VRTNQ9H8Y1 702 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GOLGA2P5Q9HBQ8 144 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 RGS18Q9NS28 235 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CNOT8Q9UFF9 292 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CAPN7Q9Y6W3 813 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ARL5CA6NH57 179 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PYGMP11217 842 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ATP5DP30049 168 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 AFF1P51825 1210 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 IFT88Q13099 833 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 C9orf57Q5W0N0 161 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CPLX4Q7Z7G2 160 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 ECHDC2Q86YB7 292 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CCDC105Q8IYK2 499 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 GRK7Q8WTQ7 553 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SEC16BQ96JE7 1060 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PPP1R10Q96QC0 940 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 KDM4CQ9H3R0 1056 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
CDK5RAP3-236ENST00000584991 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms