RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 AP3M2P53677 418 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CDH8P55286 799 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 MTAPQ13126 283 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 FZD5Q13467 585 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 ZNF667Q5HYK9 610 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 ZC3H14Q6PJT7 736 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 TSSK4Q6SA08 328 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 VSTM1Q6UX27 236 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 MON1AQ86VX9 555 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 TRMT2BQ96GJ1 504 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 MYRFLQ96LU7 910 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 C8orf33Q9H7E9 229 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 GKN1Q9NS71 199 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 TDP1Q9NUW8 608 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 NME7Q9Y5B8 376 aa14.54□□□□□ -0.08
CDK5RAP3-233ENST00000584186 SPECC1L-ADORA2AF8WAN1 911 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 TADA3O75528 432 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 STAU1O95793 577 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 C4BPAP04003 597 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CKMP06732 381 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CLDN10P78369 228 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 IFRD2Q12894 506 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 ZNF687Q8N1G0 1237 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CCDC34Q96HJ3 373 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 CYP2S1Q96SQ9 504 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■■■□□ 19.2
CDK5RAP3-233ENST00000584186 FBXO4Q9UKT5 387 aa14.53□□□□□ -0.08
CDK5RAP3-233ENST00000584186 NUP210Q8TEM1 1887 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-233ENST00000584186 COL4A2P08572 1712 aa14.52□□□□□ -0.08
CDK5RAP3-233ENST00000584186 TRAV19A0A0A6YYK7 116 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 C2orf78A6NCI8 922 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 F8VP50 259 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 CLDN5O00501 218 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRIM66O15016 1216 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 VNN1O95497 513 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 FAM163BP0C2L3 166 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 NR2F2P24468 414 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 CTHP32929 405 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 MLLT6P55198 1093 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 USP46P62068 366 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 NUCB2P80303 420 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 PNOCQ13519 176 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ITPRIPL2Q3MIP1 535 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRIM68Q6AZZ1 485 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 C1orf228Q6PIY5 440 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TXNDC11Q6PKC3 985 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 DENND5BQ6ZUT9 1274 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 RALGPS2Q86X27 583 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SMYD4Q8IYR2 804 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ADSSL1Q8N142 457 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 B3GALNT2Q8NCR0 500 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TMC2Q8TDI7 906 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TMEM174Q8WUU8 243 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 MSANTD3Q96H12 275 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SPATA17Q96L03 361 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SLC22A12Q96S37 553 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 MED10Q9BTT4 135 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ZNF518BQ9C0D4 1074 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 CHRDQ9H2X0 955 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 EBF3Q9H4W6 596 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 MMRN2Q9H8L6 949 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 KIF9Q9HAQ2 790 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 RBM12Q9NTZ6 932 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRAF3IP3Q9Y228 551 aa14.52□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SOBPA7XYQ1 873 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 AKAP3O75969 853 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ABL1P00519 1130 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 LMNAP02545 664 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 USP17L7P0C7H9 530 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRIM49P0CI25 452 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRIM49CP0CI26 452 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 CHRNB1P11230 501 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 KRT13P13646 458 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 P4HA1P13674 534 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 RPL13P26373 211 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 PIK3CAP42336 1068 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 VAMP7P51809 220 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 CACNA2D1P54289 1103 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 LRRC32Q14392 662 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 KCNB1Q14721 858 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 PON2Q15165 354 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SGSM1Q2NKQ1 1148 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ZNF528Q3MIS6 628 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ZACNQ401N2 412 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SPOPLQ6IQ16 392 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SV2AQ7L0J3 742 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 GUF1Q8N442 669 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ARL14EPQ8N8R7 260 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ATRIPQ8WXE1 791 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 HINFPQ9BQA5 517 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 ELOVL4Q9GZR5 314 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SDCBP2Q9H190 292 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 SEMA4AQ9H3S1 761 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 VRTNQ9H8Y1 702 aa14.51□□□□□ -0.09
CDK5RAP3-233ENST00000584186 TRPM5Q9NZQ8 1165 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms