RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 SLC15A4Q8N697 577 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 CAGE1Q8TC20 777 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 SLC9A6Q92581 669 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 SPSB4Q96A44 273 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 SLC46A1Q96NT5 459 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 AIFM2Q9BRQ8 373 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 AMBRA1Q9C0C7 1298 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 LRIT1Q9P2V4 623 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 CAPN11Q9UMQ6 739 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 DMTF1Q9Y222 760 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 A0A0B4J269 797 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 RASA4BC9J798 803 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 RASA4O43374 803 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 ANXA2P07355 339 aaKnown RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 NEK3P51956 506 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 HNRNPMP52272 730 aaKnown RBP eCLIP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 MRPS35P82673 323 aaKnown RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 TUBB3Q13509 450 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 ZNF169Q14929 603 aaPredicted RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 BRD3Q15059 726 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 MGAT5BQ3V5L5 792 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 SYCP2LQ5T4T6 812 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 KIAA0895LQ68EN5 471 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 TOGARAM2Q6ZUX3 1019 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 FAM186BQ8IYM0 893 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 FAM109AQ8N4B1 249 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 BOLLQ8N9W6 283 aaKnown RBP4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 SSH3Q8TE77 659 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 VOPP1Q96AW1 172 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 TBCBQ99426 244 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 DUSP26Q9BV47 211 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 PTDSS2Q9BVG9 487 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 CHST12Q9NRB3 414 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 KCTD5Q9NXV2 234 aa4.81□□□□□ -1.64
PPP4R1-227ENST00000583988 CLCA1A8K7I4 914 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 YY2O15391 372 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 TXNP10599 105 aaKnown RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 CHRM3P20309 590 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 CD38P28907 300 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 FOLR3P41439 243 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 PXNP49023 591 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 PRIM2P49643 509 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ZNF134P52741 427 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 NXPH1P58417 271 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 RPS16P62249 146 aaKnown RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 HTRA4P83105 476 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 C3orf38Q5JPI3 329 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 DGKKQ5KSL6 1271 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ICE2Q659A1 982 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 SYCE2Q6PIF2 218 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 TMEM108Q6UXF1 575 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 CATSPERGQ6ZRH7 1159 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 BEND5Q7L4P6 421 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ARHGEF25Q86VW2 580 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 RNF152Q8N8N0 203 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ATP11CQ8NB49 1132 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ACRBPQ8NEB7 543 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ACTRT2Q8TDY3 377 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 SMCR8Q8TEV9 937 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 LPIN2Q92539 896 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 PGBD1Q96JS3 809 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 SNX22Q96L94 193 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 PPP1R9BQ96SB3 815 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 MS4A7Q9GZW8 240 aaPredicted RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 CHST8Q9H2A9 424 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 ADARB2Q9NS39 739 aaKnown RBP4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 COX11Q9Y6N1 276 aa4.8□□□□□ -1.64
PPP4R1-227ENST00000583988 LOC102723971A0A1B0GUV8 181 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 MGST3O14880 152 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 MPPED1O15442 326 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 THAP12O43422 761 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 FGF18O76093 207 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 MT-ND5P03915 603 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 PPP3CBP16298 524 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 ZNF37AP17032 561 aaPredicted RBP4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 FBLP22087 321 aaKnown RBP4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 STT3AP46977 705 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 DGKEP52429 567 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 ELLP55199 621 aaPredicted RBP4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 C21orf58P58505 322 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 RHBDL3P58872 404 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 ITIH3Q06033 890 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 BIRC2Q13490 618 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 E2F2Q14209 437 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 PTPRRQ15256 657 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 LONRF1Q17RB8 773 aa4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 RBM20Q5T481 1227 aaKnown RBP4.79□□□□□ -1.64
PPP4R1-227ENST00000583988 DCAF12L1Q5VU92 463 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms