RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 HDHD2Q9H0R4 259 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
MSI2-217ENST00000583705 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 GLRBP48167 497 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 TRIM25Q14258 630 aaKnown RBP11.72□□□□□ -0.53
MSI2-217ENST00000583705 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
MSI2-217ENST00000583705 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 RDM1Q8NG50 284 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 PMM1Q92871 262 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 SENP6Q9GZR1 1112 aaPredicted RBP11.72□□□□□ -0.53
MSI2-217ENST00000583705 SMARCAL1Q9NZC9 954 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 TRIM17Q9Y577 477 aa11.72□□□□□ -0.53
MSI2-217ENST00000583705 PIPSLA2A3N6 862 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 GPR182O15218 404 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 TRIM13O60858 407 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 POLBP06746 335 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.53
MSI2-217ENST00000583705 LAMB3Q13751 1172 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 C3orf62Q6ZUJ4 267 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 S100A13Q99584 98 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 OLFM1Q99784 485 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 OR6A2O95222 327 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 DLGAP3O95886 979 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 NPEPPSP55786 919 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 PROM2Q8N271 834 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 FAM71DQ8N9W8 422 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.71□□□□□ -0.53
MSI2-217ENST00000583705 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.53
MSI2-217ENST00000583705 NMRK1Q9NWW6 199 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 SH3BP4Q9P0V3 963 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 MSH3P20585 1137 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 AP3M2P53677 418 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 PTK6Q13882 451 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 WDR36Q8NI36 951 aaKnown RBP11.71□□□□□ -0.53
MSI2-217ENST00000583705 ZNF669Q96BR6 464 aaPredicted RBP11.71□□□□□ -0.53
MSI2-217ENST00000583705 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
MSI2-217ENST00000583705 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
MSI2-217ENST00000583705 ERBB4Q15303 1308 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 ATP5HO75947 161 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 DGKKQ5KSL6 1271 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 KIAA1324Q6UXG2 1013 aaKnown RBP11.71□□□□□ -0.54
MSI2-217ENST00000583705 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 SLC35G2Q8TBE7 412 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 NLNQ9BYT8 704 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.54
MSI2-217ENST00000583705 M0R3G1 203 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 CLTBP09497 229 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 GRK4P32298 578 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 PTK7Q13308 1070 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.54
MSI2-217ENST00000583705 C16orf59Q7L2K0 433 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 DSG4Q86SJ6 1040 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 EPHX4Q8IUS5 362 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 DENND6AQ8IWF6 608 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 COL26A1Q96A83 441 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 TPD52L3Q96J77 140 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 OMDQ99983 421 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.54
MSI2-217ENST00000583705 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
MSI2-217ENST00000583705 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 AMPD2Q01433 879 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
MSI2-217ENST00000583705 USP7Q93009 1102 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 TMCC3Q9ULS5 477 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 KLHL20Q9Y2M5 609 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 ZNF185O15231 689 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 KRT34O76011 436 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 CSF1RP07333 972 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 AMD1P17707 334 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 GPD1P21695 349 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 ST13P50502 369 aaKnown RBP11.7□□□□□ -0.54
MSI2-217ENST00000583705 CBFBQ13951 182 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 CACHD1Q5VU97 1274 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
MSI2-217ENST00000583705 TNIP2Q8NFZ5 429 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 RIC8BQ9NVN3 520 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 CYB561D2O14569 222 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 TBX3O15119 743 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 SOAT2O75908 522 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 LONP2Q86WA8 852 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 KIF2CQ99661 725 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 KIFC1Q9BW19 673 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 AP3B1O00203 1094 aa11.7□□□□□ -0.54
MSI2-217ENST00000583705 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms