RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 LSM14BQ9BX40 385 aaKnown RBP12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 RHOBTB2Q9BYZ6 727 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 SIX2Q9NPC8 291 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 APEX2Q9UBZ4 518 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 USP15Q9Y4E8 981 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 LGALS16A8MUM7 142 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 CLDN5O00501 218 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 TEX33O43247 280 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 SOAT2O75908 522 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 SERPINC1P01008 464 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 POU2F2P09086 479 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 PTPN2P17706 415 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 ACO1P21399 889 aaKnown RBP12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 GRIK1P39086 918 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 MAGEA11P43364 429 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 RPL10AP62906 217 aaKnown RBP12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 ARHGAP44Q17R89 818 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 PAQR9Q6ZVX9 377 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 ELMOD1Q8N336 334 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 SLC4A11Q8NBS3 891 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 CYFIP2Q96F07 1278 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 ASB2Q96Q27 587 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 CEP72Q9P209 647 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 CDH22Q9UJ99 828 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 DNAJC12Q9UKB3 198 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
SNRPD1-204ENST00000582475 TSC2P49815 1807 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 CCDC130P13994 396 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 IL9P15248 144 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 GPR15P49685 360 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 KCNQ1P51787 676 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 FANCCQ00597 558 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 NR1I3Q14994 352 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 DDR2Q16832 855 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 VSTM1Q6UX27 236 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 DNAJB7Q7Z6W7 309 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 RNF214Q8ND24 703 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 GIPC2Q8TF65 315 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 PCMTD1Q96MG8 357 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 NECTIN4Q96NY8 510 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 HNRNPABQ99729 332 aaKnown RBP12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 ZNF518BQ9C0D4 1074 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 FAM49BQ9NUQ9 324 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 ASB3Q9Y575 518 aa12.79□□□□□ -0.36
SNRPD1-204ENST00000582475 A0A1B0GTH6 734 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 TK2O00142 265 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 PAEPP09466 180 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 VDRP11473 427 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 BMP1P13497 986 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 KRT5P13647 590 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 CD19P15391 556 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 ADORA2BP29275 332 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 KLK7P49862 253 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 UBASH3AP57075 661 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 NTHL1P78549 312 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 CBX2Q14781 532 aaPredicted RBP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 SYCP1Q15431 976 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 TAF12Q16514 161 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 SDHAF4Q5VUM1 108 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 CORO1BQ9BR76 489 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 POMKQ9H5K3 350 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 SIK3Q9Y2K2 1263 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 ATP8B3O60423 1300 aa12.78□□□□□ -0.36
SNRPD1-204ENST00000582475 FOXN3O00409 490 aaPredicted RBP12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 TRIM66O15016 1216 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 AP1G2O75843 785 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 NOL4O94818 638 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 RHOP08100 348 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 CSH1P0DML2 217 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 CSH2P0DML3 217 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 UCHL3P15374 230 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 ATF6P18850 670 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 ANXA13P27216 316 aa12.77□□□□□ -0.37
SNRPD1-204ENST00000582475 USP8P40818 1118 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms