RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 DOCK8Q8NF50 2099 aa17.44■□□□□ 0.38
RNF43-206ENST00000582293 A0A0C4DFX4 3053 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 BECN2A8MW95 431 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 F8VP50 259 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 NOL4O94818 638 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 GJA1P17302 382 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 CEBPBP17676 345 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 PPP1R26Q5T8A7 1209 aaPredicted RBP17.43■□□□□ 0.38
RNF43-206ENST00000582293 GAREM2Q75VX8 874 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 GET4Q7L5D6 327 aaPredicted RBP17.43■□□□□ 0.38
RNF43-206ENST00000582293 TMEM150AQ86TG1 271 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 SCN4BQ8IWT1 228 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 TTC39CQ8N584 583 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 CYFIP2Q96F07 1278 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 C8orf48Q96LL4 319 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 UHRF1Q96T88 793 aaPredicted RBP17.43■□□□□ 0.38
RNF43-206ENST00000582293 CSNK1G1Q9HCP0 422 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 USTQ9Y2C2 406 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 SIK3Q9Y2K2 1263 aa17.43■□□□□ 0.38
RNF43-206ENST00000582293 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 OBSL1O75147 1896 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 SLC38A8A6NNN8 435 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 TADA3O75528 432 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 GRIK1P39086 918 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 USP46P62068 366 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 RPL10AP62906 217 aaKnown RBP17.42■□□□□ 0.38
RNF43-206ENST00000582293 ARHGAP17Q68EM7 881 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 IQCEQ6IPM2 695 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 TMEM270Q6UE05 265 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 LRSAM1Q6UWE0 723 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 NPAS3Q8IXF0 933 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 FAM200AQ8TCP9 573 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 ING5Q8WYH8 240 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 TFAP2BQ92481 460 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 SPATA17Q96L03 361 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
RNF43-206ENST00000582293 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
RNF43-206ENST00000582293 COL25A1Q9BXS0 654 aaPredicted RBP17.42■□□□□ 0.38
RNF43-206ENST00000582293 GPR88Q9GZN0 384 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 ASAH2Q9NR71 780 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 PCDHB4Q9Y5E5 795 aa17.42■□□□□ 0.38
RNF43-206ENST00000582293 HHLA1C9JL84 531 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 TNFRSF10BO14763 440 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 TRIM66O15016 1216 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 EPHB6O15197 1021 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 AP1G2O75843 785 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 F11P03951 625 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 MYL4P12829 197 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 ADORA2BP29275 332 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 YWHAEP62258 255 aaKnown RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 STXBP5Q5T5C0 1151 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 KLHDC7AQ5VTJ3 777 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 CLEC20AQ6ZU45 233 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 PDZD4Q76G19 769 aaPredicted RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 RBBP8NLQ8NC74 664 aaPredicted RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 SHC3Q92529 594 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 FGF13Q92913 245 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF43-206ENST00000582293 JAKMIP2Q96AA8 810 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 SMARCD1Q96GM5 515 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 MYRFLQ96LU7 910 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 MED10Q9BTT4 135 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 LSM14BQ9BX40 385 aaKnown RBP17.41■□□□□ 0.38
RNF43-206ENST00000582293 GANQ9H2C0 597 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 KRT82Q9NSB4 513 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 FHOD1Q9Y613 1164 aa17.41■□□□□ 0.38
RNF43-206ENST00000582293 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 TEX33O43247 280 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 MICAL2O94851 1124 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 CAVIN2O95810 425 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 PAEPP09466 180 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
RNF43-206ENST00000582293 CSH1P0DML2 217 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 CSH2P0DML3 217 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 ZNF445P59923 1031 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 VEPH1Q14D04 833 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 ARHGAP44Q17R89 818 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 ENOSF1Q7L5Y1 443 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 GPRIN1Q7Z2K8 1008 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 ITIH5Q86UX2 942 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 TTC30AQ86WT1 665 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 GJD3Q8N144 294 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 TDRD5Q8NAT2 981 aaKnown RBP17.4■□□□□ 0.38
RNF43-206ENST00000582293 TRMT2BQ96GJ1 504 aaKnown RBP17.4■□□□□ 0.38
RNF43-206ENST00000582293 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 NAP1L5Q96NT1 182 aaPredicted RBP17.4■□□□□ 0.38
RNF43-206ENST00000582293 DMAP1Q9NPF5 467 aaPredicted RBP17.4■□□□□ 0.38
RNF43-206ENST00000582293 ACP6Q9NPH0 428 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 PLCB1Q9NQ66 1216 aa17.4■□□□□ 0.38
RNF43-206ENST00000582293 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF43-206ENST00000582293 EPS15L1Q9UBC2 864 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms