RNA–Protein interactions for RNA: ENST00000581886.5

MPDU1-222, Transcript of mannose-P-dolichol utilization defect 1, human

TSL 3

Gene MPDU1, Length 924 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPDU1-222	ENST00000581886	SIX4	Q9UIU6	781 aa		11.79	□□□□□ -0.52
MPDU1-222	ENST00000581886	FBXO2	Q9UK22	296 aa	Predicted RBP	11.79	□□□□□ -0.52
MPDU1-222	ENST00000581886	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.79	□□□□□ -0.52
MPDU1-222	ENST00000581886	ZNF638	Q14966	1978 aa	Known RBP	11.79	□□□□□ -0.52
MPDU1-222	ENST00000581886	DENND4C	Q5VZ89	1909 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	VPS37C	A5D8V6	355 aa	Predicted RBP	11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	TMEM191B	P0C7N4	346 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	HDC	P19113	662 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	MAGEA11	P43364	429 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	CASP5	P51878	434 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	MYO1E	Q12965	1108 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	USP4	Q13107	963 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	DMC1	Q14565	340 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	KCNB1	Q14721	858 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	ELF2	Q15723	593 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	SOWAHA	Q2M3V2	549 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	EML3	Q32P44	896 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	FAM171B	Q6P995	826 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	C4orf50	Q6ZRC1	276 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	CCDC73	Q6ZRK6	1079 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	GPD1L	Q8N335	351 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	SH3RF2	Q8TEC5	729 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	ANKRD36BP1	Q96IX9	119 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	FAM84A	Q96KN4	292 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	CLIC6	Q96NY7	704 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	CBWD1	Q9BRT8	395 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	MTMR12	Q9C0I1	747 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	LINC00597	Q9H2U6	94 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	SMOC1	Q9H4F8	434 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	GCNT4	Q9P109	453 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	ANGPTL2	Q9UKU9	493 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	WNT6	Q9Y6F9	365 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	GREB1	Q4ZG55	1949 aa		11.78	□□□□□ -0.52
MPDU1-222	ENST00000581886	FRMD3	A2A2Y4	597 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	C2orf78	A6NCI8	922 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	DCLK1	O15075	740 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	HCRT	O43612	131 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PRPF6	O94906	941 aa	Known RBP	11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	TCF3	P15923	654 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PDC	P20941	246 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PML	P29590	882 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PDE6C	P51160	858 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	DGKE	P52429	567 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	SURF1	Q15526	300 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	MAPRE1	Q15691	268 aa	Known RBP	11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	CCDC142	Q17RM4	750 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	RNF43	Q68DV7	783 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	VSTM1	Q6UX27	236 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	EZH1	Q92800	747 aa	Predicted RBP	11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	HPDL	Q96IR7	371 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	SPATA17	Q96L03	361 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	SYT15	Q9BQS2	421 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	LSM14B	Q9BX40	385 aa	Known RBP	11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	FGFBP2	Q9BYJ0	223 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PANK2	Q9BZ23	570 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	PANK4	Q9NVE7	773 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	INTS13	Q9NVM9	706 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	CDH9	Q9ULB4	789 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	ARHGAP26	Q9UNA1	814 aa		11.77	□□□□□ -0.53
MPDU1-222	ENST00000581886	ZNF233	A6NK53	670 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	KIAA0391	O15091	583 aa	Known RBP	11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	ATP2C2	O75185	946 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	KCNK5	O95279	499 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	NFATC1	O95644	943 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	CAVIN2	O95810	425 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	TNNC2	P02585	160 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	PFKL	P17858	780 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	LMO2	P25791	158 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	GBP1	P32455	592 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	GRIK1	P39086	918 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	STAT6	P42226	847 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	CREB5	Q02930	508 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	CEBPZ	Q03701	1054 aa	Known RBP	11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	DUOXA2	Q1HG44	320 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	DENND5B	Q6ZUT9	1274 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	LIMS2	Q7Z4I7	341 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	CCDC65	Q8IXS2	484 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	TSTD1	Q8NFU3	115 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	MYLPF	Q96A32	169 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	CEP295NL	Q96MC4	621 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	TRPM5	Q9NZQ8	1165 aa		11.76	□□□□□ -0.53
MPDU1-222	ENST00000581886	BCLAF3	A2AJT9	711 aa	Known RBP	11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	LEFTY2	O00292	366 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	PDGFRB	P09619	1106 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	WARS	P23381	471 aa	Known RBP	11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	BDNF	P23560	247 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	ANXA13	P27216	316 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	PSMC1	P62191	440 aa	Known RBP	11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	SHC2	P98077	582 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	CYP27A1	Q02318	531 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	REST	Q13127	1097 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	CUL4A	Q13619	759 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	USP39	Q53GS9	565 aa	Known RBP	11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	C2orf27A	Q580R0	203 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	TCEAL6	Q6IPX3	200 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	FAM173B	Q6P4H8	233 aa		11.75	□□□□□ -0.53
MPDU1-222	ENST00000581886	STXBP4	Q6ZWJ1	553 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms