RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 APOBEC3GQ9HC16 384 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 PLCB1Q9NQ66 1216 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 CDH9Q9ULB4 789 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 FRYLO94915 3013 aa14.35□□□□□ -0.11
CSNK1D-220ENST00000581737 SPDYE4A6NLX3 237 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 CCDC172P0C7W6 258 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 GNL1P36915 607 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 ARPP19P56211 112 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 FOXK2Q01167 660 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 CUL2Q13617 745 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 SPA17Q15506 151 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 MAPRE1Q15691 268 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 NFE2Q16621 373 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 MEA1Q16626 185 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 ARHGAP29Q52LW3 1261 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 SMYD5Q6GMV2 418 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 ENOSF1Q7L5Y1 443 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 UNC93AQ86WB7 457 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 PALB2Q86YC2 1186 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 ZNF461Q8TAF7 563 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 TNIP3Q96KP6 325 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 MRPL45Q9BRJ2 306 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 ZCWPW1Q9H0M4 648 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 IRF2BPLQ9H1B7 796 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 DEF6Q9H4E7 631 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.112e-13■■■■■ 69.3
CSNK1D-220ENST00000581737 FAM207AQ9NSI2 230 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 TRMT1Q9NXH9 659 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 AFF4Q9UHB7 1163 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 SORCS3Q9UPU3 1222 aa14.34□□□□□ -0.11
CSNK1D-220ENST00000581737 A8MXQ7 604 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 ADAM12O43184 909 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 TGM5O43548 720 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 HOXB8P17481 243 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 ANXA13P27216 316 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 HNRNPH3P31942 346 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 ELF1P32519 619 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 RAP1GAPP47736 663 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 NUBP1P53384 320 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 GCNT1Q02742 428 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 INCA1Q0VD86 236 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 GPR17Q13304 367 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 LILRA6Q6PI73 481 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 RSPO2Q6UXX9 243 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 CCDC149Q6ZUS6 474 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 NYAP1Q6ZVC0 841 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 OSTM1Q86WC4 334 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 C17orf53Q8N3J3 647 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 PPM1KQ8N3J5 372 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 OR10T2Q8NGX3 314 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 LMO3Q8TAP4 145 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 JAKMIP2Q96AA8 810 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 RTP3Q9BQQ7 232 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 CRACR2AQ9BSW2 395 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 ADAM7Q9H2U9 754 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 MYO1AQ9UBC5 1043 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 LIMD1Q9UGP4 676 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
CSNK1D-220ENST00000581737 WDR27A2RRH5 827 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 PI15O43692 258 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 KIF5CO60282 957 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 ABLIM3O94929 683 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 ATF2P15336 505 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 EPCAMP16422 314 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 CDH8P55286 799 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 GOLGA8FQ08AF8 430 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 GOLGA8DPQ0D2H9 430 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SFMBT2Q5VUG0 894 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 CWF19L1Q69YN2 538 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 C4orf50Q6ZRC1 276 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 VPS36Q86VN1 386 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 UBALD2Q8IYN6 164 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SPPL2BQ8TCT7 592 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 TATDN2Q93075 761 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 CCDC42Q96M95 316 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SPAG5Q96R06 1193 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SFXN1Q9H9B4 322 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 MAN1C1Q9NR34 630 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 CISHQ9NSE2 258 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 HSFX1Q9UBD0 423 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 APEX2Q9UBZ4 518 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 ATP8B3O60423 1300 aa14.32□□□□□ -0.12
CSNK1D-220ENST00000581737 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 SOWAHDA6NJG2 315 aa14.31□□□□□ -0.12
CSNK1D-220ENST00000581737 PRRG1O14668 218 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms