RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 AMPHP49418 695 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 SEC24CP53992 1094 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 PRKAA2P54646 552 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 WTAPQ15007 396 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 ANKRD1Q15327 319 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 SLC10A5Q5PT55 438 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 ATPAF1Q5TC12 328 aaPredicted RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 ARMC8Q8IUR7 673 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 CEP70Q8NHQ1 597 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 CCHCR1Q8TD31 782 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 TBC1D32Q96NH3 1257 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 UBL7Q96S82 380 aaPredicted RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 FDXACB1Q9BRP7 624 aaPredicted RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 HEYLQ9NQ87 328 aaPredicted RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 SIDT1Q9NXL6 827 aaKnown RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 PIM2Q9P1W9 311 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 ZDHHC8Q9ULC8 765 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
SUPT4H1-207ENST00000581540 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 C4AP0C0L4 1744 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 NT5C1B-RDH14C9J2C7 533 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 MPIG6BO95866 241 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 ABHD16AO95870 558 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 PRKCBP05771 671 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 DPEP1P16444 411 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 EGR1P18146 543 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 KIR2DL1P43626 348 aaPredicted RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 KIR2DL2P43627 348 aaPredicted RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 TMF1P82094 1093 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 MAN2A1Q16706 1144 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 NKPD1Q17RQ9 610 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 SKIDA1Q1XH10 827 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 TRIM71Q2Q1W2 868 aaKnown RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 MST1LQ2TV78 715 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 SLC9C2Q5TAH2 1124 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 GALNT13Q8IUC8 556 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 NETO2Q8NC67 525 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 TWSG1Q9GZX9 223 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 CHST8Q9H2A9 424 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 SYNCQ9H7C4 482 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 FBLN5Q9UBX5 448 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
SUPT4H1-207ENST00000581540 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 AP3D1O14617 1153 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 PTP4A3O75365 173 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 TSPAN9O75954 239 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 AHSGP02765 367 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 IL1R1P14778 569 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 TACR1P25103 407 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 ADSLP30566 484 aaPredicted RBP8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 HOXC13P31276 330 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 MAP3K12Q12852 859 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 ADAM9Q13443 819 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 SMAD1Q15797 465 aaKnown RBP8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 NAA35Q5VZE5 725 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 ATG16L1Q676U5 607 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 BEND4Q6ZU67 534 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 KDELC2Q7Z4H8 507 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 MILR1Q7Z6M3 343 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 TRMT2AQ8IZ69 625 aaKnown RBP8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 RSC1A1Q92681 617 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 COG3Q96JB2 828 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 HHIPL1Q96JK4 782 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 CNDP2Q96KP4 475 aaKnown RBP8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 PPP1R9BQ96SB3 815 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 NUDT5Q9UKK9 219 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 CA14Q9ULX7 337 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 TMEM5Q9Y2B1 443 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 SNX8Q9Y5X2 465 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 TAF6LQ9Y6J9 622 aa8.53□□□□□ -1.04
SUPT4H1-207ENST00000581540 CCDC78A2IDD5 438 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 GTPBP10A4D1E9 387 aaKnown RBP8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 F2RL2O00254 374 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 TSPAN3O60637 253 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 PRAMEF4O60810 478 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 ANXA1P04083 346 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 GNAI3P08754 354 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 CSF1P09603 554 aa8.52□□□□□ -1.05
SUPT4H1-207ENST00000581540 LTA4HP09960 611 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms