RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 RPN1P04843 607 aaKnown RBP22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 MYL1P05976 194 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 PRR29P0C7W0 189 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 CTHP32929 405 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 GRIK1P39086 918 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 MDH1BQ5I0G3 518 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 WDR44Q5JSH3 913 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 TDRD10Q5VZ19 366 aaKnown RBP22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 C1orf228Q6PIY5 440 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 VSTM1Q6UX27 236 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 MYCBPAPQ8TBZ2 947 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 NELL1Q92832 810 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 CYP2S1Q96SQ9 504 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 FAM83CQ9BQN1 747 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 PRMT8Q9NR22 394 aaPredicted RBP22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 RBM12Q9NTZ6 932 aaKnown RBP22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 OTOGLQ3ZCN5 2332 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 PDXKO00764 312 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 KINO60870 393 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 STAU1O95793 577 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 FAM163BP0C2L3 166 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 PTPN1P18031 435 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ATICP31939 592 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 CLDN10P78369 228 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 BIRC3Q13489 604 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 GAS6Q14393 721 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ITPRIPL2Q3MIP1 535 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 MAMSTRQ6ZN01 415 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 SLC9A9Q8IVB4 645 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ZBTB44Q8NCP5 570 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 RIN3Q8TB24 985 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ATRIPQ8WXE1 791 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 SYAP1Q96A49 352 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ELMO3Q96BJ8 720 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 SPATA17Q96L03 361 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 SLC22A12Q96S37 553 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 SCAND2PQ9GZW5 306 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 DPEP3Q9H4B8 488 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 TRPC7Q9HCX4 862 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ZSCAN32Q9NX65 697 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 ATP6V1DQ9Y5K8 247 aa22.73■■□□□ 1.23
CSNK1D-216ENST00000581108 C4BPAP04003 597 aaKnown RBP22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 NR3C1P04150 777 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 DLG4P78352 724 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 PON2Q15165 354 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 TRIM68Q6AZZ1 485 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 FSIP1Q8NA03 581 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 SUMF1Q8NBK3 374 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 TMEM174Q8WUU8 243 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 GOLPH3LQ9H4A5 285 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 KIF9Q9HAQ2 790 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 HPS4Q9NQG7 708 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 PCDHGA2Q9Y5H1 932 aa22.72■■□□□ 1.23
CSNK1D-216ENST00000581108 ATG2BQ96BY7 2078 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 A8MXQ7 604 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 AP3M2P53677 418 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 CDH8P55286 799 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 USP46P62068 366 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 DPYDQ12882 1025 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 ZNF268Q14587 947 aaPredicted RBP22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 IER2Q9BTL4 223 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 EBF3Q9H4W6 596 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 GDPD2Q9HCC8 539 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 GPR179Q6PRD1 2367 aa22.71■■□□□ 1.23
CSNK1D-216ENST00000581108 A0A1W2PQ27 194 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 A0A1W2PQ64 194 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 A0A1W2PQD8 194 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 C2orf78A6NCI8 922 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 OTOL1A6NHN0 477 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 RHOBTB3O94955 611 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 VNN1O95497 513 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 TDGF1P13385 188 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 ANXA13P27216 316 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 CACNA2D1P54289 1103 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 RUNX3Q13761 415 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 NCOA4Q13772 614 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 LRRC32Q14392 662 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF699Q32M78 642 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 CEP135Q66GS9 1140 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 KRBA2Q6ZNG9 492 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 Q6ZS52 159 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 DENND5BQ6ZUT9 1274 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 ARL14EPQ8N8R7 260 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 TTC16Q8NEE8 873 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 SMYD3Q9H7B4 428 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 VRTNQ9H8Y1 702 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 GCNT4Q9P109 453 aa22.7■■□□□ 1.22
CSNK1D-216ENST00000581108 TRAV19A0A0A6YYK7 116 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 F8VP50 259 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CLDN5O00501 218 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 LILRB5O75023 590 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CKMP06732 381 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 USP17L7P0C7H9 530 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 RAP1GAPP47736 663 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CXCL12P48061 93 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CCR3P51677 355 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 SATB1Q01826 763 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 FAM160A1Q05DH4 1040 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF667Q5HYK9 610 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 DGKKQ5KSL6 1271 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms