RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TNIP3Q96KP6 325 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 ZNF512Q96ME7 567 aaPredicted RBP10.53□□□□□ -0.72
GGA3-209ENST00000580646 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SYT15Q9BQS2 421 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 MRPL45Q9BRJ2 306 aaKnown RBP10.53□□□□□ -0.72
GGA3-209ENST00000580646 SDCBP2Q9H190 292 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 ABCB6Q9NP58 842 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 GDE1Q9NZC3 331 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 CEP72Q9P209 647 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 OBSL1O75147 1896 aa10.53□□□□□ -0.72
GGA3-209ENST00000580646 DOCK6Q96HP0 2047 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 NOTCH4Q99466 2003 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 KRBA1A5PL33 1030 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 LGALS16A8MUM7 142 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 A8MXQ7 604 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 GOLGA6L19H0YKK7 550 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 ZNF197O14709 1029 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CILPO75339 1184 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 NPR3P17342 541 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CEBPBP17676 345 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 LMO2P25791 158 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 PON1P27169 355 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 PTPN5P54829 565 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TCF15Q12870 199 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CFAP221Q4G0U5 840 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 FKBP15Q5T1M5 1219 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CYP4A22Q5TCH4 519 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 POTEHQ6S545 545 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 SCARA5Q6ZMJ2 495 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 C4orf50Q6ZRC1 276 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 PDZD4Q76G19 769 aaPredicted RBP10.52□□□□□ -0.73
GGA3-209ENST00000580646 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 UBR7Q8N806 425 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TMEM105Q8N8V8 129 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 ATAD1Q8NBU5 361 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 MYCBPAPQ8TBZ2 947 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 GPR152Q8TDT2 470 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TATDN2Q93075 761 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CEP295NLQ96MC4 621 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 ERGIC2Q96RQ1 377 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 NT5C1AQ9BXI3 368 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
GGA3-209ENST00000580646 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 SLC2A4RGQ9NR83 387 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 TAB2Q9NYJ8 693 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 APEX2Q9UBZ4 518 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 CA14Q9ULX7 337 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 YIPF1Q9Y548 306 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 NME7Q9Y5B8 376 aa10.52□□□□□ -0.73
GGA3-209ENST00000580646 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 A0A1B0GTH6 734 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 PI15O43692 258 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 MICAL2O94851 1124 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CLSTN1O94985 981 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 MYL4P12829 197 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 ATP1A3P13637 1013 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 PTPN1P18031 435 aaKnown RBP10.51□□□□□ -0.73
GGA3-209ENST00000580646 SLC9A1P19634 815 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CCR2P41597 374 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 MAGEA11P43364 429 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 RAP1GAPP47736 663 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 ALDH1A3P47895 512 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 TUFMP49411 452 aaKnown RBP10.51□□□□□ -0.73
GGA3-209ENST00000580646 NDST1P52848 882 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 EPHA5P54756 1037 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CDH8P55286 799 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 GPC5P78333 572 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 KCNMA1Q12791 1236 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 PLD1Q13393 1074 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 FILIP1LQ4L180 1135 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 SLC39A12Q504Y0 691 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CWF19L1Q69YN2 538 aaKnown RBP10.51□□□□□ -0.73
GGA3-209ENST00000580646 PHLDB3Q6NSJ2 640 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 DPY19L2P1Q6NXN4 242 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 LUZP1Q86V48 1076 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 LEMD2Q8NC56 503 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 B3GALNT2Q8NCR0 500 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 VPS16Q9H269 839 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 SIX2Q9NPC8 291 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CISHQ9NSE2 258 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 CNTN6Q9UQ52 1028 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 PCDHB5Q9Y5E4 795 aa10.51□□□□□ -0.73
GGA3-209ENST00000580646 STK25O00506 426 aa10.5□□□□□ -0.73
GGA3-209ENST00000580646 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
GGA3-209ENST00000580646 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
GGA3-209ENST00000580646 MOSPD3O75425 235 aa10.5□□□□□ -0.73
GGA3-209ENST00000580646 ECI2O75521 394 aa10.5□□□□□ -0.73
GGA3-209ENST00000580646 AOC1P19801 751 aa10.5□□□□□ -0.73
GGA3-209ENST00000580646 ACO1P21399 889 aaKnown RBP10.5□□□□□ -0.73
GGA3-209ENST00000580646 ACAT1P24752 427 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms