RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CNOT1A5YKK6 2376 aaKnown RBP11.42□□□□□ -0.58
CSNK1D-210ENST00000579308 TSC2P49815 1807 aa11.42□□□□□ -0.58
CSNK1D-210ENST00000579308 LAMA1P25391 3075 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 PTPRJQ12913 1337 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 VPS37CA5D8V6 355 aaPredicted RBP11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 C2orf78A6NCI8 922 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 PRPF6O94906 941 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 KRT19P08727 400 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 IDEP14735 1019 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 SYT1P21579 422 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 SLC39A14Q15043 492 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 SPATA2LQ8IUW3 424 aaPredicted RBP11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 GPD1LQ8N335 351 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 CPA6Q8N4T0 437 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 ARL14EPQ8N8R7 260 aaPredicted RBP11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 RPLP0P6Q8NHW5 317 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 SH3RF2Q8TEC5 729 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 CD101Q93033 1021 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 ATP2A3Q93084 1043 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 EXOC4Q96A65 974 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 HPDLQ96IR7 371 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 CEP295NLQ96MC4 621 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 HHIPQ96QV1 700 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 TRPC7Q9HCX4 862 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 WNT6Q9Y6F9 365 aa11.41□□□□□ -0.58
CSNK1D-210ENST00000579308 NUP210Q8TEM1 1887 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 ZNF233A6NK53 670 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 K7EQS6 105 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 DCLK1O15075 740 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 PFKLP17858 780 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 HDCP19113 662 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 WARSP23381 471 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 PMLP29590 882 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 TXLNAP40222 546 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 STAT6P42226 847 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 USP46P62068 366 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 CEBPZQ03701 1054 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 MYO1EQ12965 1108 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 GAB4Q2WGN9 574 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 AASDHQ4L235 1098 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 N4BP2L1Q5TBK1 243 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 STPG1Q5TH74 334 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 LMBRD2Q68DH5 695 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 C4orf50Q6ZRC1 276 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 CBWD2Q8IUF1 395 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 SCN4BQ8IWT1 228 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 FSIP1Q8NA03 581 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 SMOC1Q9H4F8 434 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 VPS45Q9NRW7 570 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 MAGEC2Q9UBF1 373 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 CFAP47Q6ZTR5 3102 aa11.4□□□□□ -0.58
CSNK1D-210ENST00000579308 ZNF840PA6NDX5 716 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 APBB3O95704 486 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 CKMP06732 381 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 PDGFRBP09619 1106 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 TMEM191BP0C7N4 346 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 ANK1P16157 1881 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 BDNFP23560 247 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 MPLP40238 635 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 OPRD1P41143 372 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 IFNAR2P48551 515 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 NR1H3Q13133 447 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 DMC1Q14565 340 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 SURF1Q15526 300 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 E2F4Q16254 413 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 IL31Q6EBC2 164 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 EPM2AIP1Q7L775 607 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 HPS3Q969F9 1004 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 ANKRD36BP1Q96IX9 119 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 SYT15Q9BQS2 421 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 LSM14BQ9BX40 385 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 RNF38Q9H0F5 515 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 KBTBD4Q9NVX7 518 aa11.39□□□□□ -0.59
CSNK1D-210ENST00000579308 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms